Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g739 ATGTGTGTATGCATGTGTGTGATGATGCATAATTTTAGGGTTATGATGATTATATTTTTATCATTTATGCCTTTATGTCAGTATGGACACAACAAATATCAGATGACATTTGCTACTGTTAAGGCAAGAAAAACTCACCCAAAACCGAACTTGCAAAGAGAAAATGGTATTTTGAGACGTTCCAAAACTCTTCATGAGAAATCTTGCAAGGAGAAAAGCTTAAGAGCTTCATATGCACATTCACAGTGTCTTGAAGTGGGAAGCCTCTCAACATATTGGATCAGGAAACAGTGCACAGTAACCATGCATATAAGGCCATCCTTCGTGATACAGGCTCATGAGCAACCACCAGTAGGCAGTAGCTACTTCACAACCATGTATAGGAGCTTGCTTCTTGTGTTAGCTTTCTCAAGCATTGCTGTATCAGAGTCAATCATCAAGACACTGCCAGGGTTTGAAGGAGATCTTCCCTTCAAACTTGAAACAGGGTATGTGGGGGTTGGCAAATCCGATGACATCCAGCTATTCTATTACTTCATCGAGTCTGAGAGGAATCCAAGCTTGGATCCTCTAATGCTTTGGCTCACTGGAGGCCCTGGGTGTTCTGCCTTTAGTGGTTTAGTCTATGAAATTGGTCCATTGATATTCGACTATGCAAATCGCAGTGGAGACATACCAGCATTATTGTCGAATCCATACTCCTGGACAAAGGTTGCCAGTATAATATTTTTGGATTCACCAGTTGGCTCTGGGTTCTCTTATGCCCAAAGTTCTGAAGGTTACCGCACTAGTGATTCACTGGCAGCAGCACATGGTTATGATTTTCTAAAGAAGTGGCTCATTGACCATCCTGAGTTTCTCAGAAATCGGTTATACATTGCTGGTGATTCGTATTCAGGCCTTTTTGTTCCAATCATTGCTCAGAAAATATCAGATGGCAACGAAGCTGGACAAGAGCCACACATGAATCTCAATGGATATTTGCTAGGGAATGCCCTAGTAGATGAAAACATCGACTTCAATTCGAGAGTTCCATTTGCTCACAGAATGACATTTTTATCAGATAAACTCTATAAGAAAACTGAGGCAAGCTGCAATGGTAAGTATCTGAAAGCAGATCCAAGCAATGGACAATGCACAGAAAATCTTAAAGTTGTTAATAAGTGCATGGAGAAAATAAATCTTCCACATGTATTGGAACCCAAGTGTGGTAGGCCACTCTCCTGGAAACCAAATGCCTTAAAATGGGAATCAATCCCTTTGGAGGAGAATTTCTCGGATTTCCTCCTTTCACCAATCCGCCAACTTCCTGAACCAACATGTCGGCTTTACAAATTTTTGTTCTCCTACATTTGGGCTAATGATAGAAGGGTTCAAAAAGCTCTTGGCATTAGAGAGGGGACAATACCAGAGTGGGTTAGATGCAATAATAGCTTAGCTTACACACATGATGTCTTCAGTACAGTGGCTTATATTCAGAAGCTCCATGAGAAAGGCTATGGAGGTCTGATTTACAGTGGTGATCATGACATGCTTGTTCCACATATGGGCACACAGGAATGGATAAATTCTCTTAACTTGTCGATTTCCAAAGACTGGGAGCCATGGTTTGTTGATGGCCAAGTTGCAGGATTCAGTATCGAGTATTCAAACAGCAAACGTGGTATGACATTTGCAACTGTAAAGGGAGGGGGTCACACAGCTCCAGAATACAAACCTAAGGAATGTCTTGCTATGATCTATAGATGGTTGGCTTATTATCCGCTCTAG 1770 41.41 MCVCMCVMMHNFRVMMIIFLSFMPLCQYGHNKYQMTFATVKARKTHPKPNLQRENGILRRSKTLHEKSCKEKSLRASYAHSQCLEVGSLSTYWIRKQCTVTMHIRPSFVIQAHEQPPVGSSYFTTMYRSLLLVLAFSSIAVSESIIKTLPGFEGDLPFKLETGYVGVGKSDDIQLFYYFIESERNPSLDPLMLWLTGGPGCSAFSGLVYEIGPLIFDYANRSGDIPALLSNPYSWTKVASIIFLDSPVGSGFSYAQSSEGYRTSDSLAAAHGYDFLKKWLIDHPEFLRNRLYIAGDSYSGLFVPIIAQKISDGNEAGQEPHMNLNGYLLGNALVDENIDFNSRVPFAHRMTFLSDKLYKKTEASCNGKYLKADPSNGQCTENLKVVNKCMEKINLPHVLEPKCGRPLSWKPNALKWESIPLEENFSDFLLSPIRQLPEPTCRLYKFLFSYIWANDRRVQKALGIREGTIPEWVRCNNSLAYTHDVFSTVAYIQKLHEKGYGGLIYSGDHDMLVPHMGTQEWINSLNLSISKDWEPWFVDGQVAGFSIEYSNSKRGMTFATVKGGGHTAPEYKPKECLAMIYRWLAYYPL* 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7903957 7934080 - Vvi3g739 Vvi3g739 784414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g739 589 Pfam Serine carboxypeptidase 150 584 IPR001563 GO:0004185|GO:0006508
Vvi3g739 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 231 243 IPR001563 GO:0004185|GO:0006508
Vvi3g739 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 244 254 IPR001563 GO:0004185|GO:0006508
Vvi3g739 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 279 304 IPR001563 GO:0004185|GO:0006508
Vvi3g739 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 556 569 IPR001563 GO:0004185|GO:0006508
Vvi3g739 589 SUPERFAMILY alpha/beta-Hydrolases 146 587 IPR029058 -
Vvi3g739 589 PANTHER SERINE CARBOXYPEPTIDASE-LIKE PROTEIN 130 585 - -
Vvi3g739 589 Gene3D alpha/beta hydrolase 140 410 IPR029058 -
Vvi3g739 589 Gene3D - 444 588 - -
Vvi3g739 589 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 130 585 IPR001563 GO:0004185|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g739 K16296 - vvi:100256695 964.911