Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g759 ATGAGATTGTTCCTAAGCGTGATATTACTATTGCGGACAAGTCGAAGAAGAGAATTGTTGGATAATGCTGATAAATTTCCAATTATTGCAATTAAATCTCTCAAAGTTGGAGACTTCCAAGGTGTATCACTGTCAACATTGAGTAAAAGTATTGCACTGGTAAATCCAGATACACCGGAATCAAAAAAGTTGAGATCCTGGTATCATGATTACCATGGTAAAGTAGCTTCAATGGCTTGTATTGGGTCTGATATCAGTCCTTCATCTAAGGGTGGAGTGAGGTCCATGTACTATGACAGGGTTTCCCTTTCTCATGTAACCAGCAACCCATCTTTGGGTGAAGACAAGCCTTCATTTTTTAGCATCAGAGCATACATAAGCTTCATCAAGCCTGAGCAAACAATGTGGTACCAGGCTTGTAAGACATGCAACAAGAAAGTCACAGATGCTATTGAATCTGGGTATTGGTGTGAAGGATGTGAAAAGAATGATGATGAGTGCAGTTGA 507 39.64 MRLFLSVILLLRTSRRRELLDNADKFPIIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHDYHGKVASMACIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPEQTMWYQACKTCNKKVTDAIESGYWCEGCEKNDDECS* 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8241137 8242407 - Vvi3g759 Vvi3g759 784434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g759 168 Gene3D - 13 78 IPR012340 -
Vvi3g759 168 SUPERFAMILY Nucleic acid-binding proteins 21 69 IPR012340 -
Vvi3g759 168 CDD RPA1_DBD_C 107 168 IPR013955 -
Vvi3g759 168 Gene3D - 82 168 IPR012340 -
Vvi3g759 168 PANTHER REPLICATION FACTOR A 1, RFA1 13 168 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Vvi3g759 168 Pfam Replication factor-A C terminal domain 119 167 IPR013955 -
Vvi3g759 168 PANTHER REPLICATION PROTEIN A SUBUNIT 13 168 - -
Vvi3g759 168 SUPERFAMILY Nucleic acid-binding proteins 97 167 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g759 K07466 - vvi:100255412 285.804