Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi3g759 | ATGAGATTGTTCCTAAGCGTGATATTACTATTGCGGACAAGTCGAAGAAGAGAATTGTTGGATAATGCTGATAAATTTCCAATTATTGCAATTAAATCTCTCAAAGTTGGAGACTTCCAAGGTGTATCACTGTCAACATTGAGTAAAAGTATTGCACTGGTAAATCCAGATACACCGGAATCAAAAAAGTTGAGATCCTGGTATCATGATTACCATGGTAAAGTAGCTTCAATGGCTTGTATTGGGTCTGATATCAGTCCTTCATCTAAGGGTGGAGTGAGGTCCATGTACTATGACAGGGTTTCCCTTTCTCATGTAACCAGCAACCCATCTTTGGGTGAAGACAAGCCTTCATTTTTTAGCATCAGAGCATACATAAGCTTCATCAAGCCTGAGCAAACAATGTGGTACCAGGCTTGTAAGACATGCAACAAGAAAGTCACAGATGCTATTGAATCTGGGTATTGGTGTGAAGGATGTGAAAAGAATGATGATGAGTGCAGTTGA | 507 | 39.64 | MRLFLSVILLLRTSRRRELLDNADKFPIIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHDYHGKVASMACIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPEQTMWYQACKTCNKKVTDAIESGYWCEGCEKNDDECS* | 169 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8241137 | 8242407 | - | Vvi3g759 | Vvi3g759 | 784434 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi3g759 | 168 | Gene3D | - | 13 | 78 | IPR012340 | - | |
Vvi3g759 | 168 | SUPERFAMILY | Nucleic acid-binding proteins | 21 | 69 | IPR012340 | - | |
Vvi3g759 | 168 | CDD | RPA1_DBD_C | 107 | 168 | IPR013955 | - | |
Vvi3g759 | 168 | Gene3D | - | 82 | 168 | IPR012340 | - | |
Vvi3g759 | 168 | PANTHER | REPLICATION FACTOR A 1, RFA1 | 13 | 168 | IPR004591 | GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310 | |
Vvi3g759 | 168 | Pfam | Replication factor-A C terminal domain | 119 | 167 | IPR013955 | - | |
Vvi3g759 | 168 | PANTHER | REPLICATION PROTEIN A SUBUNIT | 13 | 168 | - | - | |
Vvi3g759 | 168 | SUPERFAMILY | Nucleic acid-binding proteins | 97 | 167 | IPR012340 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi3g759 | K07466 | - | vvi:100255412 | 285.804 |