Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g845 ATGATAAGAGACAATTTAAAGAAATATTTCCCCATTTATCTTTTCATTATACAGGCACCTAGAACATCCCAGGCAAGTTTAGTGAAGGGACGTTCTCAAGCTAATGCTGTTGCACAGCAAGCGTTGATTGCTCATTGGCAAAGCATTGTGAAAAGCCTGAATTATTACTTGAAGATAATGAAAGCAAACCATGTTCCGCCATTCCTAGTCCGCAAGGTGTTCACTCAGATATTTTCATTCATCAATGTTCAGTTATTCAACAGTCTCCTTTTGAGGCGTGAATGCTGCTCATTCAGCAATGGGGAGTTTGTTAAGACAGGATTGGCTGAGTTAGAAAACTGGTGCCATGAAGCAACCGAAGAGTATGCTGGCTCAGCTTGGGGTGAACTGAGGCATATCAGACAAGCAGTTGGATTCCTGGTTTTATATAGGACTCAAACAGGATTCAGCAAGTTAGAGAAAAGAACTGAAAGTACTTCTCTCAGTGGTTCAAAATCATCCTATGGTGCCTCTGAGTATCAAACAATAAGAATTTATCTATTCTGTAATTATAAAAAATTCTTTAAGCTATATGCTTATAACTGTGAAAATAATAGATGA 600 38.17 MIRDNLKKYFPIYLFIIQAPRTSQASLVKGRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKTGLAELENWCHEATEEYAGSAWGELRHIRQAVGFLVLYRTQTGFSKLEKRTESTSLSGSKSSYGASEYQTIRIYLFCNYKKFFKLYAYNCENNR* 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10230648 10232611 - Vvi3g845 Vvi3g845 784520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g845 199 SMART DIL_2 72 174 IPR002710 -
Vvi3g845 199 Pfam DIL domain 73 153 IPR002710 -
Vvi3g845 199 ProSiteProfiles Dilute domain profile. 1 199 IPR002710 -
Vvi3g845 199 PANTHER MYOSIN 1 144 - -
Vvi3g845 199 PANTHER MYOSIN-5 1 144 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g845 K10357 - vvi:100853701 287.73