Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g977 ATGCCCTCCACCACCGCCAGAGCTGGTGGGATTTACTTGCCCATTATCAAGTCCTTGTCGCTTTCCGTTGGGAGTAAACCGGGCGATCCATCTGCCAGGAAACTCGGCGCTTATCTCGTTCAGTCCCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTGACTGCTGCAGCTCAAAACATGCTATGCCTCAAACTAGCTGAGGAAGTTGGGGTCATTGTTTCAAGCCCATGGGTTTCTTGGTTCAGGGCTGCTAGTGTACCAGCACTGGTTTCTCTTCTACTCTCCCCATTTATCTTATATAATCTATATCCTCCTGAGATCAAAGACACACCTGATGCCCCTGCCATGGCTGCTAAAAGGCTGGAGCATATGGGTTCTGTCACAAGAGATGAGTGGGTGATGATTGGCACAATGATTCTTGCAGTATCTTTATGGGTCTTTGGAGAGGCTCTTGGTATAGCAAGTGTTGTTGCTGCCATGCTTGGCTTATCAATATTGCTATTATTGGGAGTTCTTGAATGGGATGATTGTTTAAGTGAAAAGTCAGCGTGGGATACCTTAGCTTGGTTTGCAGTTCTAGTGGGTATGGCAGGCCAATTAACAAACCTTGGTATTGTAACCTGGATGTCAAGTTGTGTGGCAAACCTCCTTCAATCTTTCTCTTTGAGCTGGCCAGCTGCCTTCGGTGTTCTTCAGGCTTCTTACTTCTTCATTCACTACCTATTTGCAAGTCAAACTGGTCATGTAGGTGCATTGTACTCTGCTTTTCTCGCTATGCACGTGGCAGCTGGGGTGCCTGGTGTGCTGGCAGCATTGACTTTAGCTTACAATACCAATCTTTTTGGTGCACTAACACATTACAGCAGTGGTCAGGCTGCTGTCTACTATGGAGCTGGGTACGTGGACCTTCCAGATGTATTCAAAGTAGGCTTTATGATGGCCTTGAGTAATGCTGTGATTTGGGTAGTAGTTGGGTCATTCTGGTGGAAGTTCTTGGGCCTCTATTGA 1014 46.75 MPSTTARAGGIYLPIIKSLSLSVGSKPGDPSARKLGAYLVQSQFQSAGNSSALFLTAAAQNMLCLKLAEEVGVIVSSPWVSWFRAASVPALVSLLLSPFILYNLYPPEIKDTPDAPAMAAKRLEHMGSVTRDEWVMIGTMILAVSLWVFGEALGIASVVAAMLGLSILLLLGVLEWDDCLSEKSAWDTLAWFAVLVGMAGQLTNLGIVTWMSSCVANLLQSFSLSWPAAFGVLQASYFFIHYLFASQTGHVGALYSAFLAMHVAAGVPGVLAALTLAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKVGFMMALSNAVIWVVVGSFWWKFLGLY* 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15345489 15354975 + Vvi3g977 Vvi3g977 784652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g977 337 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 2 331 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vvi3g977 337 Pfam Sodium:sulfate symporter transmembrane region 2 336 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vvi3g977 337 PANTHER DICARBOXYLIC ACID TRANSPORTER2 1 337 - -
Vvi3g977 337 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 1 337 IPR030676 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g977 - - vvi:100257346 645.58