Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g102 ATGGTGGTCTTTGAGGAATTGTTTCCGGTGCTTTCCTTTGGACGGTTGAAGGGAAAGACCATGATTTTTTCGGAGTCGATGCTACGGACAATTTCTCAATCTATGGCCACAACGAGTTGCGGCGGAACCGATTTAGAGACCTGCCGAGATGAGTCAGGCGCACTCACTCTCAAATTCGTCGCAATCGCCGCAATACTCGTCGCCGGCGTCTCTGGCGTCGCCATTCCCCTCGTGGGAAAGAAGCGCCGCTTCCTCCGCACCGATGGCAACCTCTTCTTCGCCGCCAAAGCCTTCGCCGCCGGCGTCATCCTCGCCACCGGCTTCGTCCACATGTTACCCGACGGTTCGACGGCGCTGTCCGACTCGTGCCTCCCCAAAAACCCCTGGTCCAAGTTCCCCTTCTCCGGCTTCTTCGCCATGGTCTCCGCCCTCGCCACCCTCGTCGTCGACTTCGTCGGAACCCAGTACTATGAACGCAAACAGGAGCGGACTCAGGCTACTAAGGATCCCAACGGAAAGGTCCATGGACACGGCCACTCTCACGGGTTTGGGTTAGAAGATGGTGATGAGGAAGACGGCGGCATTCGACACGTTGTCGTTTCACAGGTACTGGAACTAGGAATCATATCCCACTCGGTGATAATAGGGCTATCACTGGGAGTGTCTCAGAGTCCATGCACCATAAGACCCTTAATAGCGGCATTGTCATTCCATCAGTTCTTCGAGGGCTTCGCCCTGGGAGGCTGCATCTCCCAAGCCCAGTTCAAGACCCTCTCCACTACCCTCATGGCCTGCTTCTTCGCCATCACCACCCCAGCAGGCATCGCCTTCGGCACGGCCATTTCTTCCTCCTACAATCCCGACAGCCCCCGGGCGCTGGTCATCGAAGGCATATTCGACTGCGTCTCAGCCGGCATCCTTATATACATGGCGCTGGTGGACTTGATTGCAGCGGACTTCCTGAGCAAGAGGATGAAGTGCAATGTTAGGCTCCAAGTCCTCTCATATTTGATGCTGTTTCTTGGAGCTGGCATGATGTCTGCTCTTGCCATCTGGGCTTAG 1062 56.03 MVVFEELFPVLSFGRLKGKTMIFSESMLRTISQSMATTSCGGTDLETCRDESGALTLKFVAIAAILVAGVSGVAIPLVGKKRRFLRTDGNLFFAAKAFAAGVILATGFVHMLPDGSTALSDSCLPKNPWSKFPFSGFFAMVSALATLVVDFVGTQYYERKQERTQATKDPNGKVHGHGHSHGFGLEDGDEEDGGIRHVVVSQVLELGIISHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKTLSTTLMACFFAITTPAGIAFGTAISSSYNPDSPRALVIEGIFDCVSAGILIYMALVDLIAADFLSKRMKCNVRLQVLSYLMLFLGAGMMSALAIWA* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1036987 1039484 + Vvi4g102 Vvi4g102 784881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g102 353 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 183 353 - -
Vvi4g102 353 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 194 - -
Vvi4g102 353 Pfam ZIP Zinc transporter 163 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi4g102 353 PANTHER ZINC/IRON TRANSPORTER 183 353 - -
Vvi4g102 353 PANTHER ZINC/IRON TRANSPORTER 35 194 - -
Vvi4g102 353 TIGRFAM zip: ZIP zinc/iron transport family 42 353 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g102 K14709 - vvi:100244130 653.669