Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1045 ATGGCTCGGTTCATGAGCTTTCTCCTCGCTCTTTCTCTTCTTGCCTTTGTTCCCCTTTGCTTGTCTCACAAGACCAATGGTGGTTACCTCTATCCACAATTCTACGACCACTCATGCCCCAAAGCTCAACAAATTGTGAAGTCGGTGATGGCCAAGGCTGTTGCAAGAGAAGTTCGCATGGCTGCTTCAATCATGAGGCTTCACTTTCATGACTGTTTTGTAAAGGGCTGCGATGCATCAATCCTGCTAGACAGCAGTGGTGGCATAATCTCTGAGAAGAATTCCGTCCCTAACCGTAATTCTGCTCGAGGGTTTGAAGTTATTGACGATATCAAGTCTGCAGTAGAGAAGGAATGCCCCCATACTGTATCTTGCTCTGATATCTTGGCTATTGCTGCTAGAGACTCAAGCGTCCTAACTGGGGGGCCTAGCTGGGAGGTGCCACTGGGGAGAAGGGACTCCAGAGGTGCCAGCTTGAGTGGTTCCAACAACAACATTCCTGCTCCAAACAACACCTTCCAGACCATTCTCACCAAGTTCAAGCTACACGGGCTTAACATCGTGGATCTTGTTGCTCTATCTGGGAGCCACACAATTGGGAATTCCCGGTGCACAAGCTTCAGACAGAGGCTCTACAACCAATCTGGCAATGGCCGGCCGGACTATTCGCTGGACCATTTGATAACAGCTACTTCAAGAACATATTAG 708 48.87 MARFMSFLLALSLLAFVPLCLSHKTNGGYLYPQFYDHSCPKAQQIVKSVMAKAVAREVRMAASIMRLHFHDCFVKGCDASILLDSSGGIISEKNSVPNRNSARGFEVIDDIKSAVEKECPHTVSCSDILAIAARDSSVLTGGPSWEVPLGRRDSRGASLSGSNNNIPAPNNTFQTILTKFKLHGLNIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNGRPDYSLDHLITATSRTY* 236
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 19132071 19133694 + Vvi4g1045 Vvi4g1045 785824
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1045 235 ProSiteProfiles Plant heme peroxidase family profile. 29 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vvi4g1045 235 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vvi4g1045 235 PANTHER PEROXIDASE 72-RELATED 5 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 CDD secretory_peroxidase 30 225 IPR033905 GO:0004601|GO:0042744
Vvi4g1045 235 SUPERFAMILY Heme-dependent peroxidases 30 231 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 Pfam Peroxidase 46 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g1045 235 PANTHER PEROXIDASE 5 230 - -
Vvi4g1045 235 Gene3D - 34 166 - -
Vvi4g1045 235 Gene3D Peroxidase, domain 2 167 231 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Vvi4g1045 Vvi18g1003 ECH
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1045 K00430 - vvi:100245432 444.506