Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1053 ATGGAGGTGATTCATTGGTGTTGGGTTGTGGTGGGTGTTGTGATGGGGTGGTGTTGGTATAAGAGCATCAAGAACAAGGCGAAGGAGGAGGGAAGTGGGGTTCCCAGAGGAAACCCTGGTTGGCCAGTAATAGGAGAGACTCTTGACTTCATTGCTTCTGGTTGGAGCTCTCGACCAGTCAGCTTCATGGAGAAGCGCAAGTCTCGATATGGGAAGGTGTTCAAGACAAACATATTGGGAAAGCCGGTGATAGTGTCGACGGATCCGGAGGTGAACAAGGTGGTTCTGCAGAACATTGGGAATGTATTTATCCCTGCCTATCCCCAAACCATCACGGAGATACTTGGAGAATCATCTATACTCCAGATGAACGGCAGTCTGCAGAAGAGAGTGCATGCACTGCTTGGTGGCTTCTTGAGATCACCACAACTCAAAGCTCGAATCACCCGTGACATTGAACGCTATGTCAAACTCACCCTTGATTCTTGGAAAGACCAGCACATTGTTTACGTCCAAGATGAAGTCAGAAAGATCACGTTTGACGTTCTGGTTAGAGTTCTGGTGAGCATTACTCCAGGTGAAGATTTGAACTTTATGAAGAGAGAATTCGCAGAAGTCATCAAAGGCTTGATTTGTCTCCCAATTAAACTTCCCGGAACTAGACTATATAAATCTCTCAAGGCTAAGGAGAGGCTGTTGAAGCTGGTGAGAAGGATCGTGGAGGAGAGGAAGGCAGCCATGGATAGAGGTGATCATGAGACCCTCAAGGGTCCACCCAACGATGCCGTGGACGTGCTGCTCCGTGACACAGGGGATTCATCTGAGACGTCGCGTCTGTCGTTGGATTTCATCAGTTCGAATATGATCGAGATGATGATCCCCGGGGAGGAGACTCTGCCGACCGCCATGACCCTGGCCGTCAAATTTCTAAGTGACTGCCCCGTCGCTCTGAACCAGCTGATGGAGGAGAACATGGAGTTAAAGAAGGGAAAGGCTCTTTCCGGGGAGGATTATGCCTGGACTGACTACATGTGCTTGCCATTTACTCAAAATGTGATCAATGAAACTCTGAGAATGGCAAATATCATAAATGCGGTTTGGAGAAAAGCTGTTAAAGATGTCAAAATCAAAGATTACCTGATACCAGAGGGATGGGGTGTCATGGCATCTTTCACTTCCATTCACATGGATGAAGAGAATTATGAAAACCCTTATCAGTTCAATCCATGGAGATGGGAGAAGGCAGCTAGTGTCAACAACAACAATAGCTATACACCCTTCGGAGGTGGACAGAGGCTGTGCCCTGGTTTAGAATTATCGAAACTCGAAATCTCAATTTTTCTTCATCATCTCGTCACCACCTACCGGTGGGTGGCTAAGAAGGACGACGTAGTTTACTTTCCAACAGTGAAGATGAGGAAGAAGTTACCCATCACCGTCACACCCTTACCACCCCTTTGA 1461 47.43 MEVIHWCWVVVGVVMGWCWYKSIKNKAKEEGSGVPRGNPGWPVIGETLDFIASGWSSRPVSFMEKRKSRYGKVFKTNILGKPVIVSTDPEVNKVVLQNIGNVFIPAYPQTITEILGESSILQMNGSLQKRVHALLGGFLRSPQLKARITRDIERYVKLTLDSWKDQHIVYVQDEVRKITFDVLVRVLVSITPGEDLNFMKREFAEVIKGLICLPIKLPGTRLYKSLKAKERLLKLVRRIVEERKAAMDRGDHETLKGPPNDAVDVLLRDTGDSSETSRLSLDFISSNMIEMMIPGEETLPTAMTLAVKFLSDCPVALNQLMEENMELKKGKALSGEDYAWTDYMCLPFTQNVINETLRMANIINAVWRKAVKDVKIKDYLIPEGWGVMASFTSIHMDEENYENPYQFNPWRWEKAASVNNNNSYTPFGGGQRLCPGLELSKLEISIFLHHLVTTYRWVAKKDDVVYFPTVKMRKKLPITVTPLPPL* 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19189232 19194277 + Vvi4g1053 Vvi4g1053 785832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1053 486 PRINTS P450 superfamily signature 140 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 Pfam Cytochrome P450 35 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 Gene3D Cytochrome P450 23 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 9 480 - -
Vvi4g1053 486 SUPERFAMILY Cytochrome P450 34 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PANTHER CYTOCHROME P450 26 9 480 - -
Vvi4g1053 486 PRINTS E-class P450 group IV signature 61 84 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PRINTS E-class P450 group IV signature 346 362 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PRINTS E-class P450 group IV signature 418 434 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 PRINTS E-class P450 group IV signature 434 452 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1053 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1053 K12637 - vvi:100259060 963.37