Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1060 ATGCGTTGGGTGCCTGATCGTGCCAACCTGCACATAGCCATGAACGTTTTTCAGTTTGTTTATGCTGGGAATCATGTCATTTTGAGGACTGCCCTTAACATGGGTATAAGCAAGCTTGTTTTCCCTGCTTACAGGAACATCATCGCGCTGGCTATGATTGCTCCCTTCGCTTATTTCCTAGAGAAGAAGGACAGGCCGGCACTGACTGCTTCTTTTCTTGTGCAATTCTTCCTTCTCGCATTTGTTGGAATAACAGCAAATCAAGGATTTTACTTGTTGGGGTTAGACAACACATCACCCACCTTGGCTTCTGCTACAGAGAATGCTGTCCCGGCTGTGACCTTTCTGATGGCTGCTATCCTGCGAATTGAGGAAGTTCACTTGAACAGGAGAGATGGCAAAGCTAAAGTGCTTGGAACAATCTGTAGTGTTGCCGGAGCTTCAATTATAACCATTTACAAAGGGCCAATCATATTTAGGCCAAGCCATCCTTTGAACCAATCTCTTCCATCCATTTCACTTGGAGATGCTGAGGGGAAAAATTGGACCTTGGGTTGTGTCTGTCTCATCGGTCACTGCATATGTTGGTCCGGCTGGATCGTGCTACAAGCACCAATCTTGAAGAAATACCCAGCTCAGCTCTCAGTCTCCTCTTTCACTTGCTTCTTTGCAATCCTACAGTTTCTGGCGGTTGCGGGTTTAATTGAAAGAAACTCCCAAGCCTGGCTGTTTCATTCCCGAACCGAACTCTTCTGTGTTCTCTACTCGGGAGCTGTAGTTTCAGGAATTGGCTTTTCAATACAGCTATGGGCTGTTGGCAAGGCAGGCCCTGTGTTTGTTTCGGCATATCTACCTCTACAGACCCTCCTTGTTGCTGTCATGGCATCACTTGCTTTAGGCGAAAGATTCTATTTGGGAGGGGTCCTTGGAGCAGTGTTGATCTTAGTTGGACTATACCTTGTTGTCTGGGGAAAAAGTGAAGAGGGCAAGTTTGCTAGCAGAAAGGCTGTGATTCCTTCAGTGGCAGAGAGCAGTCCATCCACAAACAACAGAAAATCCTCAGTTTTCCAGCCACTGCTCCCTACCTCTTCCAAGTGA 1098 46.81 MRWVPDRANLHIAMNVFQFVYAGNHVILRTALNMGISKLVFPAYRNIIALAMIAPFAYFLEKKDRPALTASFLVQFFLLAFVGITANQGFYLLGLDNTSPTLASATENAVPAVTFLMAAILRIEEVHLNRRDGKAKVLGTICSVAGASIITIYKGPIIFRPSHPLNQSLPSISLGDAEGKNWTLGCVCLIGHCICWSGWIVLQAPILKKYPAQLSVSSFTCFFAILQFLAVAGLIERNSQAWLFHSRTELFCVLYSGAVVSGIGFSIQLWAVGKAGPVFVSAYLPLQTLLVAVMASLALGERFYLGGVLGAVLILVGLYLVVWGKSEEGKFASRKAVIPSVAESSPSTNNRKSSVFQPLLPTSSK* 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19266017 19268731 - Vvi4g1060 Vvi4g1060 785839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1060 365 MobiDBLite consensus disorder prediction 340 365 - -
Vvi4g1060 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 326 - -
Vvi4g1060 365 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Vvi4g1060 365 Pfam EamA-like transporter family 21 151 IPR000620 GO:0016020|GO:0016021
Vvi4g1060 365 PANTHER WAT1-RELATED PROTEIN 7 349 - -
Vvi4g1060 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 153 - -
Vvi4g1060 365 PANTHER WAT1-RELATED PROTEIN 7 349 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g1060 Vvi18g1028 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1060 - - vvi:100257561 702.59