Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1066 ATGACGGGAAGCGGTGTGAATGGAATGATCGGCATGGAAGGGGGTAGGGTGGAGGAGAGCATAGGGGAGCTGAGACGAACCTTCAGAAGCGGAGAAACCCGAAGCGCTGCTTGGAGAAAAGCCCAGCTTAAAGCACTTCTCCAGCTGCTCCGCGACAATGAAAATAAGATCTTCGAAGCGCTTAAACAAGATCTTGGAAAGCATCCTGTGGAATCTTACAGAGATGAGCTTGGGGTTGTGGAAAAATCTGTCAAGTATTCTTTGAGCCATGTGGATGAATGGATGGCCCCCAAAAAGAGCTCATTGCCCTTGATTTTCTTCCCAGGAAAAGGACAAGTGCTGCCCGAACCACTTGGCCTGGTTCTCATATTCTCGTCTTGGAACTTCCCCATCTCACTGGCATTGGACCCTGTGATAGGAGCAATATCTGCAGGGAACTCAGTGGTTTTAAAACCTTCTGAGCAAGCCCCAGCATGCTCTTCCTTCCTAGCAAATACCATCCCTCTTTACCTGGACAGCAAAGCCATTAAAGTCATTGAAGGCGGAGCAGCAATCAGCCAACAATTACTGCAGCAAAAATGGGACAAGATTTTCTTTACTGGGAGTCCATCAGTGGCACGCATTGTCATGTCAGCTGCTGTGAAGCATTTAACGCCTGTTACTATAGAGCTGGGTGGGAAATGCCCTACCATCTTTGATAACCTTTCCAGCCCTTCAGATACAGAGGTCGCTGTTAAGAGGGTAGTTGGAGGAAAATGGGGGCCGTGCAATGGGCAAGCCTGCATAGGGGTCGATTATGTGCTTGTGGAAGAAAAGTTTGCCTCTCATCTGATTGAAATGCTGAAGAAGACCATCAAGAAATTCTATGGTGAAAACCCCAAAGAATTGAAGGACATCTCCAAAATTGTCAATAAGCACCATTTTCAGAGATTGCACAATCTTCTTAAAGAACCTCTTGTGGCGGCTTCCATAGTTCATGGTGGCTTAATAGATGAAGAGAAATTATTCATCGAGCCTACAATCTTGTTAGATCCTCCGCTTGATGCCGAGATCATGACAGAAGAAATCTTTGGCCCACTGCTTCCAATAATCACACTGAAAAACATAGAAGAAAGCATTGAATTCATAAACTCAAGGCCCAAACCCCTAGCCCTCTATGCCTTCACCAATGATGAAGCATTCAAGAGACGGATTCTATCAGAAACATCTTCAGGAAGTGTGACTTTTAATGATATCATTATTCAGTTTGTTTGCGACACATTGCCCTTTGGAGGTGTGGGACAGAGCGGGTTTGGGAGGTATCATGGGAAATACTCATTTGACACGTTCAGCCATGAAAAGGCAGTTCTGCGGAGAAGTTTTTTCCTTGAACTTGAGCCCAGGTTTCCTCCATGGAATGATTTCAAGCTAAAATTCATCAGATTGGTTTACAGCTTTGACTACCTTGGACTAATACTACTCTTGCTGGGGCTAAAGAGATAG 1482 45.28 MTGSGVNGMIGMEGGRVEESIGELRRTFRSGETRSAAWRKAQLKALLQLLRDNENKIFEALKQDLGKHPVESYRDELGVVEKSVKYSLSHVDEWMAPKKSSLPLIFFPGKGQVLPEPLGLVLIFSSWNFPISLALDPVIGAISAGNSVVLKPSEQAPACSSFLANTIPLYLDSKAIKVIEGGAAISQQLLQQKWDKIFFTGSPSVARIVMSAAVKHLTPVTIELGGKCPTIFDNLSSPSDTEVAVKRVVGGKWGPCNGQACIGVDYVLVEEKFASHLIEMLKKTIKKFYGENPKELKDISKIVNKHHFQRLHNLLKEPLVAASIVHGGLIDEEKLFIEPTILLDPPLDAEIMTEEIFGPLLPIITLKNIEESIEFINSRPKPLALYAFTNDEAFKRRILSETSSGSVTFNDIIIQFVCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVLRRSFFLELEPRFPPWNDFKLKFIRLVYSFDYLGLILLLLGLKR* 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19379546 19383896 - Vvi4g1066 Vvi4g1066 785845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1066 493 Pfam Aldehyde dehydrogenase family 17 449 IPR015590 GO:0016491
Vvi4g1066 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 447 IPR016162 GO:0016491
Vvi4g1066 493 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 19 493 - -
Vvi4g1066 493 PANTHER ALDEHYDE DEHYDROGENASE 19 493 IPR012394 GO:0006081
Vvi4g1066 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 226 429 IPR016163 GO:0016620
Vvi4g1066 493 PIRSF ALDH 7 486 IPR012394 GO:0006081
Vvi4g1066 493 SUPERFAMILY ALDH-like 18 464 IPR016161 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1066 K00128 - vvi:100247106 946.421