Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1067 ATGTTCTCCAATACTGGAAAATTCCACGAATATACCAGTCCTACTATAACGACGAAAAAGGTCTACGATCAGTATCAGAAGACTTTAGGGATTGATCTTTGGAGCTCTCACTACGAGCGAATGCAAGAAAACTTGCGAAAACTGAAAGAGATCAACAACAAATTAAGGAGAGAGATCAGGCAAAGAATGGGTGAAGATTTGGGCGATCTGAGCATTGAGGACCTGCGCGGCCTTGAGCAGAAGATGGACGCTTCTTTAGGATTAGTACGCGAACGGAAGTACCACGTGATCAAAACTCAGACCGAGACCTACAGGAAAAAGGTCAGGAACTTGGAAGAACAACACGGAAATCTCCTTCTCAACTTTGAGGCAAAATGCGATGATCCACATTACGGATTAGTGGAAAATGATGGAGATTATGAATCAGCGGTGGCATTCGCAAACGGGGCTTCCAACCTCTATGCCTTTCGCCTGCATCAGGCCCACCCTAATCTTCACCATGATGGGGGATATGGATCACATGATCTGCGCCTTGCTTGA 540 45.56 MFSNTGKFHEYTSPTITTKKVYDQYQKTLGIDLWSSHYERMQENLRKLKEINNKLRREIRQRMGEDLGDLSIEDLRGLEQKMDASLGLVRERKYHVIKTQTETYRKKVRNLEEQHGNLLLNFEAKCDDPHYGLVENDGDYESAVAFANGASNLYAFRLHQAHPNLHHDGGYGSHDLRLA* 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19395437 19397804 + Vvi4g1067 Vvi4g1067 785846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1067 179 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 179 - -
Vvi4g1067 179 Pfam K-box region 35 120 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vvi4g1067 179 PANTHER FLORAL HOMEOTIC PROTEIN DEFICIENS ISOFORM X1 1 179 - -
Vvi4g1067 179 SUPERFAMILY SRF-like 1 49 IPR036879 GO:0003677|GO:0046983
Vvi4g1067 179 Coils Coil 38 65 - -
Vvi4g1067 179 ProSiteProfiles K-box domain profile. 38 128 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g1067 Vvi18g1037 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1067 K09264 - vvi:100233014 370.933