Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1215 ATGGATGCTAAGAAGCCCTTCGTCGCCGTTCTTCTCATACAAACTATATATGCTGGCATGTTCTTAGTCTCCAAGGCTGCATTTAATGTAGGTATGAATAATTTCATCTTCGTCTTCTACAGACAGGCTGCAGCAACTGTTTTCTTGGTTCCTATTGCCATCATTTTTGAGAGAAAAAATGTGCCACCACTCTCTTTCGTGACCTTCTGCAAAATTTTTATGCTTTCTCTATTTGGGATTACTCTAAGCTTGGATGTTAACGGTGTTGCCCTCATTTATACATCTGCAACTTTGGCTGCTGCAACAACAAATTGCCTTCCTGTCATTACCTTTTTCTTGGCCGTTTTACTCAGGATGGAAACTGTGAAGTTGAGGACATCCTCTGGCATGGCAAAGATTGCAGGTGTTTTAATTTGCATAGCAGGTGCTGCAACAATAGCATTTTACAAGGGCCCCCATTTGCAACTCATGTTACATCATCACCTTTTTGGACACCATACCAGCCACGAACATCAATCTCATGTAAGCTCTGGTGCAACGTGGGTGAAGGGATGCTTACTCATGCTCATGTCCAACACCTTCTGGGGCTTGTGGCTTGTATTGCAGGCTTACATCATGAAAAGCTACCCTGCAAAGCTTCTGCTGACAACCCTACAGTGCCTTTTGAGCTCAATTCAATCATTTTTCATTGCTATTGCTTTGGAAAGAGACCCTGATCAGTGGAAGCTGGGCTGGAATGTGAAACTCGTAGCTGTAGCCTACACGGGAATTGTTGTGACAGGTGTTACATACTACCTACAAACATGGGTCATCGAGAAGAAGGGGCCTGTTTTTCTAGCCATGTCCACACCATTTGCCCTAATCATTACTATATTTTGTTCAGCAATTTTCTTAGGCGAGGCCATTAGTTTGGGAAGTATCTTAGGTGGGATCTTGTTGGTTGGAGGGCTATATAGTGTTTTATGGGGGAAGAGCAAAGAACAGAAGATGGAAAAAACTTGTTCGACAGCCCAAGCTGAGAAGGAAACAGAGCTTAAAGAAGAAGTGGCTGCTCAGAGTCCACCCCCACCATTTTTTGTGTAA 1083 43.4 MDAKKPFVAVLLIQTIYAGMFLVSKAAFNVGMNNFIFVFYRQAAATVFLVPIAIIFERKNVPPLSFVTFCKIFMLSLFGITLSLDVNGVALIYTSATLAAATTNCLPVITFFLAVLLRMETVKLRTSSGMAKIAGVLICIAGAATIAFYKGPHLQLMLHHHLFGHHTSHEHQSHVSSGATWVKGCLLMLMSNTFWGLWLVLQAYIMKSYPAKLLLTTLQCLLSSIQSFFIAIALERDPDQWKLGWNVKLVAVAYTGIVVTGVTYYLQTWVIEKKGPVFLAMSTPFALIITIFCSAIFLGEAISLGSILGGILLVGGLYSVLWGKSKEQKMEKTCSTAQAEKETELKEEVAAQSPPPPFFV* 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21012615 21016482 + Vvi4g1215 Vvi4g1215 785994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1215 360 PANTHER WAT1-RELATED PROTEIN 8 332 IPR030184 GO:0016021|GO:0022857
Vvi4g1215 360 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Vvi4g1215 360 Pfam EamA-like transporter family 8 145 IPR000620 GO:0016020|GO:0016021
Vvi4g1215 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 326 - -
Vvi4g1215 360 PANTHER WAT1-RELATED PROTEIN 8 332 - -
Vvi4g1215 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1215 - - vvi:100242046 668.307