Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1313 ATGGCTGACGTGACGGCTACAGTCAACAGAACAGACGATATGATCGTCTGTTATTCGCCCACCATGATCACCACCAATGGCATTTGGCAGGGTGACAACCCTTTAGATTATTCTCTTCCTCTCTTCATCTTGCAATTAACTTTGGTTGTTGTTACCACTCGCCTCCTGGTTTTCATCTTGAAGCCTCTTCGCCAGCCTCGTGTCATCTCTGAGATCTTGGGTGGTGTATTGTTGGGCCCTTCGGTCCTCGGGCAAAACCTGCATTTGGCCAACCTGATATTCCCCCTTCGAAGTGTGATGGTACTAGAGACAATGGCAAATGTAGGGCTTCTTTACTTCCTCTTTCTGGTTGGGGTAGAAATGGACCTCACAGTAATCCGGAGGACTGGAAAAAAGGCCATTGCCATAGCTATTATTGGCATGATCTTGCCCTTCATCATAGGTTGCGCATTCTCCTTAATTCTTCACCATGAAGATCGCCAAATGAATCGGAGCACTTTTGTGCTCTTCCTTGGGGTTGCTCTCTCCGTCACTGCATTCCCAGTGTTAGCCCGGATTCTCGCAGAGCTCAAACTCATCAACACAGAGCTTGGCAGAATGGCCATGTCGTCTGCTCTAATCAATGACATGTGTGCTTGGGTTCTCTTAGCTGTGGCCATTGCCTTGGCCGAGAATGAGAGTAGTTCATTGGCTTCCCTCTGGGTGATACTATCCAGTGTATTCTTTGTCGTAGTTTGTATTTTCATTGTCAGACCAGTTATCTCCTGGATGATTCGGAGAACTCCAGAGGGGGAATCCTTCAGCGAGTTCTATATATGTCTCATTCTCACTGGGGTAATGATCTCTGGTTTCGTTACAGATGCCATTGGAACGCACTCTGTTTTTGGAGCTTTTGTCTTTGGTCTGGTTATTCCAAATGGACAACTTGGTGTCACTCTCATAGAAAAGCTTGAGGACTTTGTCTCAGGGCTTCTGCTTCCTCTCTTCTTTGCCATCAGCGGGCTTAAGACTGATGTCACCAAAATCCACGGAGCTCTTACATGGGGATTTCTATTTCTGGTCATCATCCTTGCTTGCGCTGGCAAAATTGCTGGGACTCTCATTGTTGCTCTGTTTTATCAGATGCCCTTACGTGAAGGAATTGTCCTTGGCTTGCTTATGAACACCAAAGGCCTCGTTGAAATGATCGTCCTCAACGTTGGGAGGGACCAACATGTCTTAGACGATGAAACATTCGCCATCATGGTTACAGTAGCTGTCATTATGACTTCCATCATTGCACCCATTGTAACACATATTTACAAGCCGGCGAGGAAATTCATCCCATACAAACGAAGAACAATTCAGAGGTCAAAGCCAGACGGTGAGCTTAGAATACTGGTCTGCATCCACACCCCTCGAAATGTCCCAACAATCATCAACCTCCTCGAAGCCTCCCACCCTTCCAAGAAATCACCAATATGCGTCTATGTACTCCACCTAGTAGAACTTACTGGCCGCGCATCTGCTATGCTTATTGTTCACAACACTCGGAAATCTGGCTGCCCAGCCCTCAACAGGACCCAAGCTCAATCCGACCACATCATCAACGCATTTGAGAACTACGAGCAGCATTCCTCCTGCGTGTCCGTTCAGCCCCTGACAGCAATTTCCCCTTACTCCACCATGCATGAAGATATCTGCAACTTGGCAGAAGACAAACGTGTAGCCTTTATCATCATCCCTTTCCATAAGCAGCAAACAGTTGATGGAGGGATGGAAGCCACAAACCCAGCTTTTCGAGCAGTGAACCAGAATGTATTAGCAAATGCACCTTGCTCAGTCGGTATTCTTGTTGACAGAGGCTTGAATGGGTCCACACGCTTGGCTGCAAGTCAGGTATCTCATCACATTGCTGTGCTGTTCTTTGGCGGACCAGATGATAGAGAGGCACTGTCATATGCAGAGAGGATGTCTGAACATCCTGGGATTAGCCTCACCGTGATGCGGTTCATTGCTGGGGATGAAACGGTTGAGTCCACAGTGGAGCCTAGCAAGAAACAGCTTGATGAGGAGTATATAAACGACTTCAGGATGAAGAATTCTAATGATGAATCGATTGTTTACACAGAGAAGATTGTTAACAATGGAGAGGAGACAGTGGCGGCAGTAAGATCAATAGACAGCATACATGACCTGTTCATAGTTGGGAGAGGACAAGGAATGATATCACCACTCACAGCAGGGCTCACTGACTGGAGCGAGTGCCCAGAGCTCGGAGCGATTGGAGATATGCTGGCCTCTTCAGATTTTGCATCAACAGTTTCAGTGCTGGTGGTACAACAGTATGTTGGAGTAGGGCCACAAGAAGATGGATTGGGAACGCCTGACAGCCCGGCTCCACCAATCGACCAATATAATAGTCTCCTGCAGATGAACCGGAGGCCTCCGCAGCAGAGGGGCCCGGCTATGTACAGTCCATAA 2463 47.67 MADVTATVNRTDDMIVCYSPTMITTNGIWQGDNPLDYSLPLFILQLTLVVVTTRLLVFILKPLRQPRVISEILGGVLLGPSVLGQNLHLANLIFPLRSVMVLETMANVGLLYFLFLVGVEMDLTVIRRTGKKAIAIAIIGMILPFIIGCAFSLILHHEDRQMNRSTFVLFLGVALSVTAFPVLARILAELKLINTELGRMAMSSALINDMCAWVLLAVAIALAENESSSLASLWVILSSVFFVVVCIFIVRPVISWMIRRTPEGESFSEFYICLILTGVMISGFVTDAIGTHSVFGAFVFGLVIPNGQLGVTLIEKLEDFVSGLLLPLFFAISGLKTDVTKIHGALTWGFLFLVIILACAGKIAGTLIVALFYQMPLREGIVLGLLMNTKGLVEMIVLNVGRDQHVLDDETFAIMVTVAVIMTSIIAPIVTHIYKPARKFIPYKRRTIQRSKPDGELRILVCIHTPRNVPTIINLLEASHPSKKSPICVYVLHLVELTGRASAMLIVHNTRKSGCPALNRTQAQSDHIINAFENYEQHSSCVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEATNPAFRAVNQNVLANAPCSVGILVDRGLNGSTRLAASQVSHHIAVLFFGGPDDREALSYAERMSEHPGISLTVMRFIAGDETVESTVEPSKKQLDEEYINDFRMKNSNDESIVYTEKIVNNGEETVAAVRSIDSIHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDMLASSDFASTVSVLVVQQYVGVGPQEDGLGTPDSPAPPIDQYNSLLQMNRRPPQQRGPAMYSP* 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22994814 22997726 - Vvi4g1313 Vvi4g1313 786092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1313 820 Pfam Sodium/hydrogen exchanger family 48 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi4g1313 820 Gene3D - 41 439 IPR038770 -
Vvi4g1313 820 PANTHER CATION/H + ANTIPORTER 11 788 - -
Vvi4g1313 820 PANTHER CATION/H+ EXCHANGER 3 11 788 - -
Vvi4g1313 820 MobiDBLite consensus disorder prediction 782 820 - -
Vvi4g1313 820 MobiDBLite consensus disorder prediction 794 808 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1313 - - vvi:100244861 1503.8