Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1326 ATGGATTTGCTCACCCATTTGCTAGCATTCGCAGGGCTTTTTCTGGGTTTGTTGTATTGGTATAATCGATGGAGAGTTAGGACTCTCACTCACAATAGTAAGGGCATATCAGCCCCAAAACCCCCTGGTGCCTGGCCAATCATAGGTCATCTGCATCTCCTAAGTGGCCAAGTCCCAATTTTCCGAACCCTTGGAGCCATGGCTGATAAGCACGGCCCTGTGTTCATGATCCAACTAGGGATGCACCCAGCGGTAGTGGTCAGTAGTCATGAGGCTGTTAAGGAATGCTTCACTACCAACGACAAGGTTTTTGCCTCACGCCCACGTTCAAGCGTGTCAAAGCTCTTGGGTTACAACTATGCAGGGTTTGGCTTTGCACCTTACGGACCTTTTTGGCGTGAGATGCGCAAGCTATCGGTGGTGGAAATTCTCTCTGCTCGCCGCCTCAATGAATTGAAGGATGTACGGATTTCTGAATTGGATGCTTGCATCCAAGACTTGTACTCACTTGGCAAAGACAACAACTGGATCAGTCCAATAGAAGTGGTTATGAGTGAGTGGTTTGAACACTTGACATTCAATTTCGTTCTTAGGATGATTGCTGGGAAGAGATATTTTGATAACGCGGTCCATGGAAATGAAGAGGCAAGGGGTGCTATAATAGCCATTAAAAAATTCCTGTCTCTATCTGGGGCCTTTGTTCCATCAGATGTGTTTCCATTTCTTGAACGGTTGGATTTGAAAGGCTATTTGGGCTCCATGAAGCATGTTGCTGAGGAATTGGACTGTCTTGTAGGAAGTTGGGTAGAAGAACATGTTATGAGGTTAAAGAGTGAGCCCGGAAGCAGGCATGACTTCATTGATGTACTGCTATCAGCAGTCCAAGACACCTCCATGTTCGGCCACAGTCGTGAAACTGTTATCAAGGCAACGATAGGGAATCTCATCGTGGGAGGCTCAGACAGCACATCTATTACCTCGACATGGATCCTGTCTGCATTACTGAATAATAGAGAAGCAATGAAGCGTGCTCAGGAAGAGCTAGATCTAAAAGTTGGGAGGAGCAGATGGGTGGAAGAATCAGATATTCAGAAGCTAGATTACCTTCGGGCTATCATTAAGGAGTCTCTAAGGCTATATTCAGCTGCTCCCCTATTAGTACCGCATGAGGCGACCCAAGATTGTCATGTTTGTGGGTATCACATTCCTAAAGGTACCCGTTTGTTCGTGAATGCATGGAAGTTACACCGAGATCCGCGTGTTTGGTCCAACCCGGAAGAGTTTGAGCCAGAGAGGTTTTTGGGAAGTCATGCAAACCTGGATGTTTTTGGTCATCAATTTGAGCTCATCCCATTTGGGTCTGGTAGAAGGGCTTGCCCAGGGATCAACATGGCTTTGCAAATGTTACACTTGACATTTGCTAGGTTACTTCAAGGATTTGACATGGCCACACCATCAAATGCTCCGGTCGACATGACTGAAGGGATAAGTTTCACCATGCCTAAGTTAACCCCACTATGCACCAAAAAGCCGCCAACTGTGGAATCGCTTTTGAATCTCATCGACTCTCATCTCTTCTCCTCTCTGCTATCCAATTTCGAGCTGAATCCATCTTTTGAACTTCAATGGCATAGGCGGCAATTGCCTTACGTAGCCAATAATTTCAACTCTTTGGATCAGGTTACTGATGCATTGAAAAAATCTGGTCTTGAATCATCAAACTTAATTCTTGGTATAGACTTCACAAAGAGCGATGAGTGGATAGCTCCATTCTCCAGTCTCCATTCCATCATGGATTTGCTCACCCAATTGCTAGCATTCGCAGGGCTTTTTCTGGGTTTGTTGTTTTGGTATAATCGATGGATAGTTAGGACTCTCACTCACAATAGTAAGGGCATATCAGCCCCAAAACCCCCTGGTGCCTGGCCAATCATAGGTCATCTGCATCTCCTAAGTGGCCAAGTCCCAATTTTCCGAACCCTTGGAGCCATGGCTGATAAGCACGGCCCTGTGTTCATGATCCAACTAGGGATGCACCCAGCGGTAGTGGTCAGTAGTCATGAGGCTGTTAAGGAATGCTTCACTACCAACGACAAGGTTTTTGCCTCACGCCCACGTTCTAGCGTGTCAAAGCTCCTGGGTTACAACTATGCAATGTTTGGCTCTGCACCTTATGGACTTTTTTGGCGTGAGATGCGCAAGCTATCAGTGGTGGAAATTCTCTCTGCTCGTCGTCTCAATGAATTGAAGGATGTACGGATTTCTGAATTGGATGCTTGCATCAAAGACTTGTACTCACTTGGCAAAGATAACAACTGGATCAGTCCAATAAAGGTGGTTATGAGTGAGTGGTTTGAACACTTGACATTCAATTTCGCCCTTAGGATGATTGCAGGGAAGAGATATTTTGATAACGCGGTCCATGGAAATGAAGAGGCAAGGGGTGCTATAATAACTATTAAGAAATACCTGTCTCTATCTGGGGCCTTTGTTCCATCAGATGTGTTCCCATTTCTTGAACGGTTGGATTTGCAAGGCTATTTGGGCTCCATGAAGCATGTTACAGAGGAATTGGACTGTCTTGTAGGAAGTTGGGTAGAAGAACATGTTATGAGGTTAAAGAGTGAGCCCGGATGCAGGCATGACTTCATTGATGTACTGCTATCAACAGTCCAGGACACGTCCATGTTCGGCCACACCCGTGAAACTGTTATCAAGGCAACAATAGTGAATCTCATCGTGGGAGGCTCAGACAGCACATCTATTACCTCGACATGGATCCTGTCTGCATTACTGAATAATAGAGAAGCAATGAAGCATGCTCAGGAAGAGCTAGATCTAAAAGTTGGGAGGAGCAGATGGGTGGAAGAATCAGATATTCAGAAGCTAGATTACCTTCGGGCTATCATTAAGGAGTCTCTAAGGCTATATCCAGCTGCTCCCCTATTAGTACCGCATGAGGCGACCCAAGATTGTCATGTTTGTGGGTATCACATTCCTAAAGGTACCCGTTTGTTCGTGAATGCATGGAAGTTACACCGAGATCCGCGTGTTTGGTCCAACCCGGAAGAGTTTGAGCCAGAGAGGTTTTTGGGAAGTCATGCAAACCTGGATGTTTTTGGTCATCAATTTGAGCTCATCCCATTTGGGTCTGGTAGAAGGGCTTGCCCAGGGATCAACATGGCTTTGCAAATGTTACACTTGACATTTGCTAGGTTACTTCAAGGATTTGACATGGCCACACCATCAAATGCTCCGGTCGACATGACTGAAGGGATAAGTTTCACCATGCCTAAGTTAACCCCACTACGCTCGTCAATCAATCCCATTAATTCAATCTAA 3342 45.69 MDLLTHLLAFAGLFLGLLYWYNRWRVRTLTHNSKGISAPKPPGAWPIIGHLHLLSGQVPIFRTLGAMADKHGPVFMIQLGMHPAVVVSSHEAVKECFTTNDKVFASRPRSSVSKLLGYNYAGFGFAPYGPFWREMRKLSVVEILSARRLNELKDVRISELDACIQDLYSLGKDNNWISPIEVVMSEWFEHLTFNFVLRMIAGKRYFDNAVHGNEEARGAIIAIKKFLSLSGAFVPSDVFPFLERLDLKGYLGSMKHVAEELDCLVGSWVEEHVMRLKSEPGSRHDFIDVLLSAVQDTSMFGHSRETVIKATIGNLIVGGSDSTSITSTWILSALLNNREAMKRAQEELDLKVGRSRWVEESDIQKLDYLRAIIKESLRLYSAAPLLVPHEATQDCHVCGYHIPKGTRLFVNAWKLHRDPRVWSNPEEFEPERFLGSHANLDVFGHQFELIPFGSGRRACPGINMALQMLHLTFARLLQGFDMATPSNAPVDMTEGISFTMPKLTPLCTKKPPTVESLLNLIDSHLFSSLLSNFELNPSFELQWHRRQLPYVANNFNSLDQVTDALKKSGLESSNLILGIDFTKSDEWIAPFSSLHSIMDLLTQLLAFAGLFLGLLFWYNRWIVRTLTHNSKGISAPKPPGAWPIIGHLHLLSGQVPIFRTLGAMADKHGPVFMIQLGMHPAVVVSSHEAVKECFTTNDKVFASRPRSSVSKLLGYNYAMFGSAPYGLFWREMRKLSVVEILSARRLNELKDVRISELDACIKDLYSLGKDNNWISPIKVVMSEWFEHLTFNFALRMIAGKRYFDNAVHGNEEARGAIITIKKYLSLSGAFVPSDVFPFLERLDLQGYLGSMKHVTEELDCLVGSWVEEHVMRLKSEPGCRHDFIDVLLSTVQDTSMFGHTRETVIKATIVNLIVGGSDSTSITSTWILSALLNNREAMKHAQEELDLKVGRSRWVEESDIQKLDYLRAIIKESLRLYPAAPLLVPHEATQDCHVCGYHIPKGTRLFVNAWKLHRDPRVWSNPEEFEPERFLGSHANLDVFGHQFELIPFGSGRRACPGINMALQMLHLTFARLLQGFDMATPSNAPVDMTEGISFTMPKLTPLRSSINPINSI* 1114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23260405 23277500 + Vvi4g1326 Vvi4g1326 786105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1326 1113 Pfam Cytochrome P450 636 1099 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 Pfam Cytochrome P450 39 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 SUPERFAMILY Cytochrome P450 39 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 Coils Coil 331 351 - -
Vvi4g1326 1113 PANTHER CYTOCHROME P450 FAMILY PROTEIN 606 1109 - -
Vvi4g1326 1113 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 506 - -
Vvi4g1326 1113 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vvi4g1326 1113 Gene3D Cytochrome P450 29 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 Gene3D Cytochrome P450 625 1108 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PANTHER CYTOCHROME P450 82C3-RELATED 606 1109 - -
Vvi4g1326 1113 PANTHER CYTOCHROME P450 82C3-RELATED 10 506 - -
Vvi4g1326 1113 SUPERFAMILY Cytochrome P450 636 1104 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS P450 superfamily signature 915 932 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS P450 superfamily signature 968 979 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS P450 superfamily signature 1047 1056 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 PRINTS P450 superfamily signature 1056 1067 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g1326 1113 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1049 1058 IPR017972 GO:0005506|GO:0016705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1326 - - vvi:100258522 1011.52