Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g138 ATGAGTTTGGGCGCGGCCGAGGATGAAAATTCAACGTCGGAGATTCATATGCCGGCGGATGTAGATTGGCATATGCTTGATAAATCAAGGTTTTTCATCCTTGGTGCCGCTTTATTTTCCGGTGTGTCCGGCGCCCTTTATCCCATTGTAGTGCTAAAAACGCGACAACAGGTTTCGCCTTCGCAAATTTCTTGTTTCAGAATGTCCTATTCCATGTTGAACCACGAGGGTTTGAGAGGATTTTACAGAGGATTTGGCACATCCCTGATGGGAACAATCCCGGCTCGGGCCCTTTACATGGCTGCCCTTGAAGTCACTAAGAGTAATGTAGGAGCAGCAACTCTGAGAATAGGGTTTTCCGAAACAACTGCAGCAGCTATCGCTAATGCTGCTGCAGGGTTGAGTTCAGCCATGGCCGCCCAGCTTTATCGTGGTGGCATCGATGCATTCAGCAAAATTCTGTATTCTGATGGACTGCGAGGCCTATACAGGGGGTTCGGGATTTCGATATTGACTTACGCTCCATCAAATGCAGTTTGGTGGAGTACTTACTCTATAGCTCATAGGCTCATCTGGAGTGGGATTGGATGCTATTCCATTCTTTACCTTAGAACATTAACTTCCTCTTTTTATCAGTATCTGCAACTCCATAAACAGATAAATCCGTAA 669 46.19 MSLGAAEDENSTSEIHMPADVDWHMLDKSRFFILGAALFSGVSGALYPIVVLKTRQQVSPSQISCFRMSYSMLNHEGLRGFYRGFGTSLMGTIPARALYMAALEVTKSNVGAATLRIGFSETTAAAIANAAAGLSSAMAAQLYRGGIDAFSKILYSDGLRGLYRGFGISILTYAPSNAVWWSTYSIAHRLIWSGIGCYSILYLRTLTSSFYQYLQLHKQINP* 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1288745 1290719 + Vvi4g138 Vvi4g138 784917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g138 222 SUPERFAMILY Mitochondrial carrier 25 195 IPR023395 -
Vvi4g138 222 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 142 - -
Vvi4g138 222 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 143 202 - -
Vvi4g138 222 Pfam Mitochondrial carrier protein 145 191 IPR018108 -
Vvi4g138 222 Pfam Mitochondrial carrier protein 41 108 IPR018108 -
Vvi4g138 222 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 109 IPR018108 -
Vvi4g138 222 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 142 - -
Vvi4g138 222 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 143 202 - -
Vvi4g138 222 Gene3D Mitochondrial carrier domain 7 138 IPR023395 -
Vvi4g138 222 Gene3D Mitochondrial carrier domain 139 212 IPR023395 -
Vvi4g138 222 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 190 IPR018108 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g138 K15121 - vvi:100252641 367.466