Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g196 | ATGGCGGTGGTGAGTGATAGCATGATCGAGAAACTTGCGTCTGCGAGAAGGTCATTGAAGTCAAGCTTGGAGAAATCAAGGGTGCTAGGGTTAGCTCTAGAGAAAAGCGGGCCTAGATTGGAAGAGATTAATCAAAGATTGCCTTCGCTCGAGGCTGCGGTTCGACCTATTCGAGCCCAGAAGGAAGCCCTTGTCGCAGTTGGCGGTCACATCAATCGAGCTGTCAGCCCTGCTGCGGCGGTTCTGAATGTGTTTGATGCTGTTCACGGGCTCGAAAAATCGCTATTGTCCGATCCCCGCAACGATCTTCCGGGTTATCTCTCAGTGTTGAAAAGGCTTGAGGAGGCATTGAAGTTTCTAGGTGATAATTGTGGGTTAGCGATTCAGTGGTTGGAGGATATAGTGGAGTACTTGGAGGATAATTTGGTTGCCGATGAACGGTATCTTTCGAATTTGAAGAAGTCCCTGAAGAATCTCAGGGAATTGCAGAATGATGAAGAGCGAGTTTGCCTCGATGGCGGGTTATTGGAAGCTGCATTGGATAAATTGGAATGTGAATTCCGGCTTCTCTTGACAGAAAACATAATGGTTATACAGAAATTGCAAGCAATCATTGGGAGATTAACTGCAAATAAGAGACTTGAGAAGTGCATTTCTATATATGTTGAGGTTAGGAGTTCCAATGTTAGAGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATTTCGATCTCCGAATTCAATGATGTGCAGAGCATAGAGGGGTACATAGCTCAGTGGGGCAAGCATTTGGAGTTTGCAGTGAAACATTTGTTTGAGGCAGAGTACAAGCTCTGTAATGATGTCTTTGAGCGGATTGGATTGGATGTTTGGATGGGCTGCTTTGCGAAGATAGCTGCACAAGCGGGAATTCTTGCATTTCTTCAGTTTGGGAAGACGGTTACAGAGAGTAAGAAGGACCCTATCAAGCTGTTGAAGCTATTGGATATCTTTGCATCCTTGAACAAGTTGAGATTGGATTTCAACCGCCTTTTTGGTGGAGGGGCATGTATTGAGATCCAAAACCTGACTAGGGATCTCATCAAAAGCATCATTGAGGGGGCGTCTGAGATTTTCTGGGAACTTTTGTTTCAAGTGGAATTACAGAGGCAAACAGCACCCCCTTCAGATGGGAGTGTTCCAAGACTGGTGAGTTTTCTTACTGATTACTGTAATAGGCTACTTGGGGACAATTATAAGCCGATCTTGACACAAGTTCTTGTTATTCACCGAAACTGGAAGCATGAGAAATTCCAAGAAAGACTACTTGTTGATGCCATTTTAAACATCATTAAAGCTATTGAGAAAAACTTAGAAACATGGTCAAAGGGTTATGAGGATGCTACCCTTGCCAATCTTTTTCTGATGAACAATCACTGGCATTTGCATAAACACTTGAAGGGAACAAAGCTTGGAGATCTTCTGGGGGATTCTTGGTTAAAAGAACATGATCAGTCCAAGGACTACTATGCTGCAATATTCCTGAAAGATAGCTGGGGGAAGCTTCCATCCCTCCTAAGTAGGGAAGGTCTGATGCTGTTCTCAGGTGGGCGTGCTACTGCTCGTGATCTTGTCAAGAAAAGGTTGAAATCTTTCAACGAAGCTTTTGATGACATGTATAAGAAACAGTCCAATTGGGTCGTGTCTGAAAGAGATTTGAGGGACAAAACTTGTCAGCTTATAGTGCAGGCAGTTGTTCCAGTCTACCGGAGCTACATGCAAAACTATGGGCCCTTGGTTGAGCAAGACCCAAGTGCTAGTAAGTATGCAAAGTACACTGTACAGACATTGGAGAATATGCTTGCCTCTCTCTTTCAGCCTAAGCCAGCAAAATATGAGGAGGAGGAGGAGCAGAGCCGCAGCGCAGCCGCAGCAGCCATGGAGGTTATGGTGGAGGTGTCTTCGATCCCGGCGTACGTTGGCGGGATGACGCAGGATAAGCAGAGGGAGGAGGAGGTTGGAGGCGGCGTGGTGGTGGGTCGCTTTTCCGGCCAGAGGGACAAAGGGGGGTTTCTGAGTGGATCGGGGAAGAGGGGCGTCGGATCGGAGAAGCCGGAGGAGTCGTCGGAGGCTTCTTCGCTCGGTAATCTCAGCGATGACGAGGACGACGAGGGGGACGACGTCGTTTCATCAAGCGGTGGTGGAGGTAACGACGTCGTATCGGCTAACGCAGGCTTCGCTTCTCTGGGTTCCCTGGAGGACTCTCTTCCCATCAAGAGGGGGTTGTCGAATTGTTTCTCGGGAAGATCAAAGTCGTTTGCGAATCTATCAGACGTGAACACGGTGGCGGATTTGCAGAAGGAAGAGAATCCATTCAACAAGAGGAGAAGAACCCTGATTGCATACAAGCTGTCGAGAAAAAATTCAGGTTTCTACAGTTGGCAAAACCCAAATTCAATGCCTCTTTTGACCCTCAAAGAAGACCCAAATCAAGAGAACAACTCATCAGAAGACGAAGAAGAAGACAGAGAACAAAAACTCCATCAGAGGAAGTTCAAGACCTTCAAATCAACAAGCTGTTTTTCTCTTGCAGATCTGTAA | 2583 | 46.46 | MAVVSDSMIEKLASARRSLKSSLEKSRVLGLALEKSGPRLEEINQRLPSLEAAVRPIRAQKEALVAVGGHINRAVSPAAAVLNVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALKFLGDNCGLAIQWLEDIVEYLEDNLVADERYLSNLKKSLKNLRELQNDEERVCLDGGLLEAALDKLECEFRLLLTENIMVIQKLQAIIGRLTANKRLEKCISIYVEVRSSNVRASLQALDLDYLEISISEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFAKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGGACIEIQNLTRDLIKSIIEGASEIFWELLFQVELQRQTAPPSDGSVPRLVSFLTDYCNRLLGDNYKPILTQVLVIHRNWKHEKFQERLLVDAILNIIKAIEKNLETWSKGYEDATLANLFLMNNHWHLHKHLKGTKLGDLLGDSWLKEHDQSKDYYAAIFLKDSWGKLPSLLSREGLMLFSGGRATARDLVKKRLKSFNEAFDDMYKKQSNWVVSERDLRDKTCQLIVQAVVPVYRSYMQNYGPLVEQDPSASKYAKYTVQTLENMLASLFQPKPAKYEEEEEQSRSAAAAAMEVMVEVSSIPAYVGGMTQDKQREEEVGGGVVVGRFSGQRDKGGFLSGSGKRGVGSEKPEESSEASSLGNLSDDEDDEGDDVVSSSGGGGNDVVSANAGFASLGSLEDSLPIKRGLSNCFSGRSKSFANLSDVNTVADLQKEENPFNKRRRTLIAYKLSRKNSGFYSWQNPNSMPLLTLKEDPNQENNSSEDEEEDREQKLHQRKFKTFKSTSCFSLADL* | 861 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1913810 | 1923695 | - | Vvi4g196 | Vvi4g196 | 784975 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g196 | 860 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 9 | 195 | - | - | |
Vvi4g196 | 860 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 196 | 626 | - | - | |
Vvi4g196 | 860 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 9 | 195 | IPR004140 | GO:0000145|GO:0006887 | |
Vvi4g196 | 860 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 196 | 626 | IPR004140 | GO:0000145|GO:0006887 | |
Vvi4g196 | 860 | MobiDBLite | consensus disorder prediction | 674 | 731 | - | - | |
Vvi4g196 | 860 | Pfam | Exo70 exocyst complex subunit | 260 | 616 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Vvi4g196 | 860 | Gene3D | Exocyst complex component Exo70 | 79 | 628 | - | - | |
Vvi4g196 | 860 | MobiDBLite | consensus disorder prediction | 809 | 844 | - | - | |
Vvi4g196 | 860 | MobiDBLite | consensus disorder prediction | 809 | 824 | - | - | |
Vvi4g196 | 860 | Coils | Coil | 149 | 169 | - | - | |
Vvi4g196 | 860 | SUPERFAMILY | Cullin repeat-like | 81 | 619 | IPR016159 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g196 | K07195 | - | vvi:100254158 | 1165.21 |