Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g249 ATGGAGCTCTCTTTACTCCACATACTTCCATGGGCCACCCTCTTCACCACTCTTTCTCTTTCATTCCTCATCTACAAGCTCATGATCATCTCCCATGGCACACCCAGAAACCTTCCGTCCGGCAATACCGGTCTGCCCTATATCGGAGAAAGCATCCAGTTCCTCTCCAATGGCAGAAAGGGTCATCCCGAGAAGTTCATTTCTGAGAGAATGTTGAAGTTCTCATCCAAAGTTTTCAAGACCTCACTCTTCGGAGAAACTGCTGCAGTCTTCTGTGGCTCGGCCGGGAACAAGTTCTTGTTCTCCAACGAGAACAAGCTTGTGACCGCATGGTGGCCGAGCTCCGTAAACAAAATCTTCCCTTCCTCTCTGCAAACCTCCTCGCAGGAAGAATCAAAGAAAATGAGAAAGCTGCTTCCGGGCTTTCTCAAACCCGAAGCCCTCCAAAGATATATCAAAGACCCCGACCATGTCGAAAAGCTTGCAGAGCCCTTCAACGAACTGGCCGCCGGAATCATAGCCCTACCTATTGATTTGCCTGGGACGTCATTTAACAAGGGGATCAAAGCTTCAAACCTGGCGTCGACGACGCAGGACATATTGTCACATATGCTTCTCACTTGTGATGAGAATGGAGAGTACATGAATGAAGAGGATATAGCTGATAAAATTCTTGGGTTGCTCGTCGGAGGTCATGACACAGCCAGTGCTACCATTACTTTTATTGTCAAGTTTCTTGCAGAGCTGCCTCATGTTTACGATGAAGTTTTCAAGGAACAAATGGAGATAGCAAAATCAAAGGCCCCAGGTGAGCTGTTGAATTGGGAGGACATTCCAAAGATGAGGTATTCATGGAATGTAGCATGTGAAGTGATGAGACTGGCACCACCCGTTCAAGGAGCTTTCCGAGAAGCCATGAATGACTTCATCTTCGAGGGTTTCTCCATTCCAAAGGGATGGAAGCTGTACTGGAGCACGCACTCGACCCACCGGAACCCGGAGTTCTTCCCCAAGCCGGAAAAATTCGACCCCTCGAGGTTTGACGGAAAGGGACCAGCCCCTTACACCTATGTGCCTTTCGGAGGAGGACCCAGGATGTGCCCTGGCAAAGAGTATGCTAGATTGGAAGTACTAGTGTTCATGCACAATTTAGTGAGAAGGTTCAAATGGGAGAAGCTGCTGCCAGATGAGAAGATTATAGTAGACCCCATGCCCATTCCTGCAAAAGGCCTTCCCATTCGCCTCCATCATCACCAACCCTAG 1263 48.69 MELSLLHILPWATLFTTLSLSFLIYKLMIISHGTPRNLPSGNTGLPYIGESIQFLSNGRKGHPEKFISERMLKFSSKVFKTSLFGETAAVFCGSAGNKFLFSNENKLVTAWWPSSVNKIFPSSLQTSSQEESKKMRKLLPGFLKPEALQRYIKDPDHVEKLAEPFNELAAGIIALPIDLPGTSFNKGIKASNLASTTQDILSHMLLTCDENGEYMNEEDIADKILGLLVGGHDTASATITFIVKFLAELPHVYDEVFKEQMEIAKSKAPGELLNWEDIPKMRYSWNVACEVMRLAPPVQGAFREAMNDFIFEGFSIPKGWKLYWSTHSTHRNPEFFPKPEKFDPSRFDGKGPAPYTYVPFGGGPRMCPGKEYARLEVLVFMHNLVRRFKWEKLLPDEKIIVDPMPIPAKGLPIRLHHHQP* 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2470500 2472631 + Vvi4g249 Vvi4g249 785028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g249 420 PRINTS E-class P450 group I signature 325 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS E-class P450 group I signature 239 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS E-class P450 group I signature 357 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS E-class P450 group I signature 367 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS E-class P450 group I signature 219 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS P450 superfamily signature 358 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS P450 superfamily signature 230 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 190 416 - -
Vvi4g249 420 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 11 152 - -
Vvi4g249 420 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 152 193 - -
Vvi4g249 420 PANTHER CYTOCHROME P450 26 190 416 - -
Vvi4g249 420 PANTHER CYTOCHROME P450 26 11 152 - -
Vvi4g249 420 PANTHER CYTOCHROME P450 26 152 193 - -
Vvi4g249 420 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 360 369 IPR017972 GO:0005506|GO:0016705
Vvi4g249 420 SUPERFAMILY Cytochrome P450 34 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 Gene3D Cytochrome P450 31 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g249 420 Pfam Cytochrome P450 195 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g249 Vvi11g831 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g249 K20667 - vvi:100242305 810.446