Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g256 ATGACACCAGAGACAGGGACGTATCGCTGGATGGCCCCAGAGATGATCCAGCACAGGCCATACACTCAGAAGGTAGATGTCTACAGCTTTGGAATTGTCCTGTGGGAGCTCATCACAGGCTTGCTTCCCTTCCAGAACATGACTGCAGTGCAGGCAGCCTTTGCTGTGGTGAACAAGGGAGTGAGGCCAATTATCCCAAGCGACTGTCTTCCTGTTCTAAGCGATATCATGACCCGCTGCTGGGACGCCAATCCTGAAGTGCGTCCTCCCTTCACTGAGGTTGTCAGGATGCTTGAGAATGCAGAAATTGAGATCATGACAACTGTGCGGAAGGCACGCTTTAGGTGCTGCATGACCCAGCCTATGACAACCGACTGA 378 52.65 MTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPIIPSDCLPVLSDIMTRCWDANPEVRPPFTEVVRMLENAEIEIMTTVRKARFRCCMTQPMTTD* 126
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2501023 2518571 - Vvi4g256 Vvi4g256 785035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g256 125 PANTHER BNAA09G41440D PROTEIN 1 113 - -
Vvi4g256 125 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi4g256 125 SUPERFAMILY Protein kinase-like (PK-like) 3 98 IPR011009 -
Vvi4g256 125 SMART tyrkin_6 1 98 IPR020635 GO:0004713|GO:0006468
Vvi4g256 125 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Vvi4g256 125 Pfam Protein tyrosine and serine/threonine kinase 7 98 IPR001245 GO:0004672|GO:0006468
Vvi4g256 125 PANTHER SERINE-THREONINE PROTEIN KINASE 1 113 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76617 PF07714 PK_Tyr_Ser-Thr 3.80E-26 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g256 - - vvi:100257625 262.692