Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g368 ATGAATTGCATTAGTACAACTAAAATTAGCAAGCGAGCTAAAAGAGGTCCTTCAAATAAGAGTTCAAAGGTGGCTCTGACTGTTTTGGTAGAAACTCCGCAGGTTCAAGAGGATGCCAAAACAAAGGTAACTGGAGAAACATCCAACATAAGGACAGTGGAAACACAAGATAGTACTTTACTGGTTAACTTGGAAGAGGATGAATTCATTCAACATACATTTAGTAGCTTAAGAACAAGTGATGTAGCTGATCCGACTCAATTAGAAGAGACATCCATAAAACCTGCTCAACACCAAATTCTTTCTGAGGAAGAAGAAGATAATCTTTTCAAGGCACAGGGATCCCCAAATGGTCCATGCATTGCAGATATTGATTCAGACCACAAGGATCCTCAAATGTGCAGCTTGTATGCCTCTGACATCTATGATAATTTTCTTTGTAGAGAGCTTGACCGAAGACCTTCTGCTAATTTTATGGACTCAGTCCAACGAGACATCACTCCAAACATGCGAGGAATTCTGGTTGATTGGCTTGTAGAGGTTTCAGAAGAATATAAGCTGGTTCCAGATACACTTTACCTCACAGTTAATCTTATCGATCGATTTCTATCCAAAAATTACATTGAAAAGCAAAGACTCCAACTGCTTGGTGTTACTTGCATGCTAATTGCCTCAAAGTATGAAGAAATATGTGCACCACATGTGGAAGAGTTCTGCTTCATCACCGATAACACCTACACAAGAGAAGAGGTATTGAAAATGGAGAGTCAAGTTTTGAATTTTCTGGGCTTTCAACTATCTGTTCCCACCACAAAAAAGTTTCTCAGGAGGTTCATTCAGGCAGCACAGACCTCTTACAAGGTTCCTTGTGTTGAACTGGAGTTCTTGGCGAATTATATAGCAGAGCTAACTCTTGTTGACTACAGCTTCCTAAAGTACCTACACTCCCTGATTGCTGCATCTGCCGTATTTCTTGCCAGATGGACACTCAATCAGTCAGACCACCCTTGGAATGCAACTCTAGAGCACTACACCACTTACAAGGCATCAGACCTGAAGAATGTAGTTCTCGCAATGCAAGATTTGCAACTCAACACTAATGGTTCCTCTCTGAATGCCATACGTGACAAGTATAAGCTAAAAAAGTTCAAGAGCGTGGCCACTCTCTCCTCCGAAAAAGCAGTGCAGGAACTCTTCCAAGATTAA 1206 40.96 MNCISTTKISKRAKRGPSNKSSKVALTVLVETPQVQEDAKTKVTGETSNIRTVETQDSTLLVNLEEDEFIQHTFSSLRTSDVADPTQLEETSIKPAQHQILSEEEEDNLFKAQGSPNGPCIADIDSDHKDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQRDITPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNYIEKQRLQLLGVTCMLIASKYEEICAPHVEEFCFITDNTYTREEVLKMESQVLNFLGFQLSVPTTKKFLRRFIQAAQTSYKVPCVELEFLANYIAELTLVDYSFLKYLHSLIAASAVFLARWTLNQSDHPWNATLEHYTTYKASDLKNVVLAMQDLQLNTNGSSLNAIRDKYKLKKFKSVATLSSEKAVQELFQD* 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3630777 3637892 + Vvi4g368 Vvi4g368 785147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g368 401 ProSitePatterns Cyclins signature. 171 202 IPR006671 -
Vvi4g368 401 SUPERFAMILY Cyclin-like 268 391 IPR036915 -
Vvi4g368 401 SMART cyclin_7 176 260 IPR013763 -
Vvi4g368 401 SMART cyclin_7 273 361 IPR013763 -
Vvi4g368 401 Pfam Cyclin, C-terminal domain 269 391 IPR004367 -
Vvi4g368 401 PIRSF Cyclin_A_B_D_E 2 400 IPR039361 -
Vvi4g368 401 SMART Cyclin_C_2 269 392 IPR004367 -
Vvi4g368 401 PANTHER CYCLINS 35 399 IPR039361 -
Vvi4g368 401 PANTHER CYCLIN-A2-4 35 399 - -
Vvi4g368 401 CDD CYCLIN 267 359 IPR013763 -
Vvi4g368 401 MobiDBLite consensus disorder prediction 1 21 - -
Vvi4g368 401 SUPERFAMILY Cyclin-like 129 266 IPR036915 -
Vvi4g368 401 Gene3D - 154 267 - -
Vvi4g368 401 Pfam Cyclin, N-terminal domain 140 267 IPR006671 -
Vvi4g368 401 Gene3D - 140 388 - -
Vvi4g368 401 CDD CYCLIN 170 259 IPR013763 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g368 K06627 - vvi:100245617 789.26