Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g398 ATGATTGTAAGTGAGTGGGGTCAACCATTCTCTGTATTCCATAAGCTATCTTTGTGTGTTCTCCTTGGGGTGAGCTGTGGTGCAAATATTGCAGACTATGTGGCTCAGAGGTCTGTAGAGGCAGACAAGCTTTTAGACCCTATTAAGGTGGTGGCCCAAATTCTGATGTACCATTTTTTCATTGGAAGTGTCCCCACAAAATCAGAGATTAATCTGGCTAACTCTTACTTCTATGACAAAGCTATGTGCTTGCTTGCATGGAAACTCTTCCTACCTGAGGAAGAAGTGAACCTAAACCACCCAACTGCCAACCCTCTGATTCCTGGGAGGGGACCACCCTTGAAGTGCATGCCTCCAACACTGACAGTTGTGGCAGAGCATGACTGGATGCGAGACCGAGCCATTGCTTATTCAGAGGAGCTCCGGAAAGCCCAAGCCTGTGCTGAGGACATTGCCATATGGCATCAGGCTGTTCAATTTATCTGGTTTTCTCTTGTCATTACTATAAAGATAAGCAATTTCTTTTTACGAGGGTGCAATTATTATGATCTGTGCGAACGTTCATTTATTCATTTATTCATGTTCTTTATGTCCATGTTGAAATGTGTTATTTAA 615 43.25 MIVSEWGQPFSVFHKLSLCVLLGVSCGANIADYVAQRSVEADKLLDPIKVVAQILMYHFFIGSVPTKSEINLANSYFYDKAMCLLAWKLFLPEEEVNLNHPTANPLIPGRGPPLKCMPPTLTVVAEHDWMRDRAIAYSEELRKAQACAEDIAIWHQAVQFIWFSLVITIKISNFFLRGCNYYDLCERSFIHLFMFFMSMLKCVI* 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4031893 4032929 + Vvi4g398 Vvi4g398 785177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g398 204 Gene3D alpha/beta hydrolase 14 161 IPR029058 -
Vvi4g398 204 Pfam alpha/beta hydrolase fold 16 146 IPR013094 GO:0016787
Vvi4g398 204 PANTHER ARYLACETAMIDE DEACETYLASE 17 148 - -
Vvi4g398 204 PANTHER CARBOXYLESTERASE 11-RELATED 17 148 - -
Vvi4g398 204 SUPERFAMILY alpha/beta-Hydrolases 20 145 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g398 - - vvi:100251099 253.832