Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g429 | ATGAAAACATTGTTTGATCTGCCTGAAGAGACCAAGAAGAAGCACTCCAGCACTAAGCCTTACCACAGCTACCAGGGCAAGTGCCCAATTGTGCCTCTCCTTGAGAGCTTTGGCATCGATGACGCCCCCCAACCCCAGGCTGCTCAGGCCTTCACCAACCTCCTGTGGCCCGAGGGGAATCCGGCCTTCTGTGGAGCCCTCATTTCCATGGCCACAAAGATGCTGGAACTGAACTTCATCGTCCTGAAACTGATCCTGGAGAGCCTTGGCATGGAGAAGTACTACAATTCCCAGAAAGAGAACAGTGCCAGCGTTTTCCGGTTGATGAAGTACACAGTCCCTCCGAGCAATGACTCGGCCATTGGCCTGGTTACACACACAGATAAGAACATCCTCACCATCTTATGTCAAAATGAAGTGCAAGGCCTGGAGGTTCTCTCCAAAGAAGGCAACTGGATTCGACTAAATTTCTGCAAGGATTCCTTCATAGTCATCATAGGTGACTTGTTGAAGGCATGGACGAATGGGAGGCTTCATGCAGTGAGGCATAGGGTGGTGATGAACGGCGACAAAGATCGCTACTCTTGTGGGATGTTTGTGTTGCCGGGGGACACGGTAACCATTGAAGTGCCTGAAGAACTGGTCGACAATGATCATCCTCTTCGCTACCGGCCCTTCACTTATTCTGATTACATGTCCTTCTTCACTTCCAATATATGCGATGATGCCCTTGAGGTTTATGCTGGTGTTCGATCTTGA | 759 | 49.93 | MKTLFDLPEETKKKHSSTKPYHSYQGKCPIVPLLESFGIDDAPQPQAAQAFTNLLWPEGNPAFCGALISMATKMLELNFIVLKLILESLGMEKYYNSQKENSASVFRLMKYTVPPSNDSAIGLVTHTDKNILTILCQNEVQGLEVLSKEGNWIRLNFCKDSFIVIIGDLLKAWTNGRLHAVRHRVVMNGDKDRYSCGMFVLPGDTVTIEVPEELVDNDHPLRYRPFTYSDYMSFFTSNICDDALEVYAGVRS* | 253 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 4415689 | 4418065 | + | Vvi4g429 | Vvi4g429 | 785208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g429 | 252 | PANTHER | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED | 1 | 249 | - | - | |
| Vvi4g429 | 252 | PANTHER | 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED | 1 | 249 | - | - | |
| Vvi4g429 | 252 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Vvi4g429 | 252 | Pfam | 2OG-Fe(II) oxygenase superfamily | 109 | 200 | IPR044861 | - | |
| Vvi4g429 | 252 | ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 101 | 202 | IPR005123 | - | |
| Vvi4g429 | 252 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Vvi4g429 | 252 | Gene3D | - | 1 | 248 | IPR027443 | - | |
| Vvi4g429 | 252 | SUPERFAMILY | Clavaminate synthase-like | 2 | 241 | - | - |
Event-related genes
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g429 | - | - | vvi:100267884 | 513.072 |