Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g435 ATGGGAAACATTAGAGTTCCTTTTAAAGGGATCATTAACGATTATAAAGGAAGAGCACCATGCTATAAACAAGATTGGACTGGTGCGCATGGCTCCGGTGTTAGGATATTGGCTCCAACTTTCTATATATTCTTTGCTTCTGCCCTTCCCGTCATTGCCTTTGGGGAGCAATTGAGTAGGGAAACAGATGGGCACTTGAGCTCAGTTCAAACTCTAGCTTCTACTGCTATATGTGGAATCATCCACTCAATTTTCGGTGGGCAGCCTTTGTTGATTTTAGGAGTTGCAGAGCCCACAGTTATAATGTACACTTACTTGTACAATTTCGCCAAAGGAAAGTCAGACTTGGGGAAGGATCTATATCTAGCTTGGGCTGGGTGGGTTTGCGTCTGGACAGCTTTAATGCTATTTCTTCTTGCAATATTCAATGCTTGCACCATCATCTCTAGGTTTACAAGGGTTGCAGGGGAACTCTTTGGCATGTTGATTGCAGTTCTTTTTGTTCAAGAGGCTATTAAGGGAGTAGTGAGCGAATTTAATATTCCCAAAGATGAAGATCCTAAATCAGTTAAGTATGAATTCCAGTGGCTTTATACAAATGGACTGCTTGGGATCATTTTCTCTTTTGGTGTACTTTTTACTTCCCTAAAGAGCAGAAGAGCAAGGTCATGGCGATATAGCACTGGATGGGTCCGAGAGTTCATTGCAGATTATGGGGTTCCTCTTATGGTCCTGTTGTGGACAGCATTATCTTACAGTATACCTAAGAAAGTTCCTTCTGGAGTTCCCAGGAGGCTCTTTTGTCGTGCTCCCTGGGATTCTGATTCAAATTACCAATGGGCTGTAGTACAGGATATGGGAAAGGTCCCATTGGGGTACATCTTTGCTGCCTTGATACCAGCTGTGATGATAGCGGGCTTATACTTTTTCGACCACAGTGTAGCTTCACAGATGGCACAGCAGAAGGAGTTCAATCTCAAAAACCCTTCTGCTTACCATTATGACCTGTTCTTGCTCGGAGTTATGACTCTGCTTTGTGGGTTGCTTGGATTTCCTCCTTCAAATGGAGTCCTCCCACAATCCCCCATGCACACTAAGAGTCTTGCAGTCCTCAAGAAGCTGTTGATTCGAAAAAAGATGGTTAAAAGCGCCAAGGAATGTATAAAAGAGCAAGCAAGCAACTCAGAAATGTATGGAAGGATGCAAGCTGTGTTCATAGAAATGGACACAGCTCCTAATGATGTTTCAGTAGACAAAGAGTTGAAGGACTTGAAGGAGGCTGTAATGAATAGCGAAGATGGAGGAGACACAAAAGGCAAATTCGATCCTGAGAAGCACATCGATCCTTACTTGCCTGTTCGAGTTAATGAGCAAAGAGTGACCAACCTGTTGCAGTCCCTCCTTGTAGGCATATCTGTATGTGCTATCCCTGTCATCAAGGCTATACCTACCTCAGTTCTTTGGGGATACTTTGCCTACATGGCCGTTGATAGCCTCCCTGGGAATCAGTTCTGGGAAAGGATCTTGCTGCTCTTTATCACCCCTGGCCGCCGTTACAAAGTCCTGGAAGGGGTTCATGCTTCATTTGTGGAAACAGTACCATTCAAGTACATTGCGACATTCACGCTCTTCCAACTCGTATATCTTATGATTTGCTTTGGAATAACATGGATACCTATAGCTGGAATACTGTTCCCAGTGCCATTCTTTCTTCTCATAAGCATAAGACAGTACATTCTGCCCAAGCTGTTCCAAACTCAGCATCTTCGAGAACTGGATGCCGCTGAGTACGAGGAAATTGCTGGAGCCCCACAGCGCAGCCGCAGCATCTCAATCAGGGAGAGAGAAGAAGCTGTTCCTGGAAGTCAAGGGACTGACGAAGATTTTTTTGATGCGGAGATATTGGATGAAATGACTACCAATAGAGGGGAGTTGAAGCTTAGAACTGTAAGCTTCAATGAAGATAGATTCTTTCAGGTGCACCCAGAAGACACCAGTCGGACGCAGTGA 2010 44.38 MGNIRVPFKGIINDYKGRAPCYKQDWTGAHGSGVRILAPTFYIFFASALPVIAFGEQLSRETDGHLSSVQTLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYNFAKGKSDLGKDLYLAWAGWVCVWTALMLFLLAIFNACTIISRFTRVAGELFGMLIAVLFVQEAIKGVVSEFNIPKDEDPKSVKYEFQWLYTNGLLGIIFSFGVLFTSLKSRRARSWRYSTGWVREFIADYGVPLMVLLWTALSYSIPKKVPSGVPRRLFCRAPWDSDSNYQWAVVQDMGKVPLGYIFAALIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDLFLLGVMTLLCGLLGFPPSNGVLPQSPMHTKSLAVLKKLLIRKKMVKSAKECIKEQASNSEMYGRMQAVFIEMDTAPNDVSVDKELKDLKEAVMNSEDGGDTKGKFDPEKHIDPYLPVRVNEQRVTNLLQSLLVGISVCAIPVIKAIPTSVLWGYFAYMAVDSLPGNQFWERILLLFITPGRRYKVLEGVHASFVETVPFKYIATFTLFQLVYLMICFGITWIPIAGILFPVPFFLLISIRQYILPKLFQTQHLRELDAAEYEEIAGAPQRSRSISIREREEAVPGSQGTDEDFFDAEILDEMTTNRGELKLRTVSFNEDRFFQVHPEDTSRTQ* 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4471175 4475207 + Vvi4g435 Vvi4g435 785214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g435 669 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Vvi4g435 669 Pfam HCO3- transporter family 200 373 IPR011531 GO:0006820|GO:0016021
Vvi4g435 669 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016021
Vvi4g435 669 Gene3D Helical hairpin bin 18 60 - -
Vvi4g435 669 PANTHER BORON TRANSPORTER 6-RELATED 1 665 - -
Vvi4g435 669 PANTHER ANION EXCHANGE PROTEIN 1 665 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g435 Vvi11g419 ECH
Vvi4g435 Vvi9g469 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g435 K24194 - vvi:100247413 1333.55