Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g584 ATGGCTGGTTTCTTGAGAGCTCTGTGTTATTCTCAGGTTCTGGTGTTTTTACTCTCCATCACCTGCTCAGCAGCCAAAGAATTCTTGGTTGGAGGCAAGACCAATGCGTGGAAGATCCCATCTTCCCAATCCGATTCTCTCAACAAATGGGCTGAGAGCTCTCGCTTCCTGGTCGGCGACTCTCTCGTGTGGACATACGACAAAGAGAAAGATTCAGTGTTGAAGGTGAGGAGGGAAGCATACATAAGCTGCAACACATCAGACGCCATTGAAGAGTACAACGGCGGGAACACCAAGGTGACGCTGGATAAATCTGGGCCTCACTATTTCATCAGTGGGGCTGACGGGCACTGCGAGAAGGGGCAGAAGGTCATAGTGGTGGTGCTGTCTCAGAGGCACAGGTTGGTTGGCGTTTCTCCTGCCCCTTCTCCCTCCGAGGTAGAGGGTCCTGCCGTGGCTCCCACTAGCGATGCTTCCAGTTTCAAGGCTGGGTATTTGGTGGCTTTAGGGGTTTTGGTAGGGTTTATGTGGATGTAG 537 52.14 MAGFLRALCYSQVLVFLLSITCSAAKEFLVGGKTNAWKIPSSQSDSLNKWAESSRFLVGDSLVWTYDKEKDSVLKVRREAYISCNTSDAIEEYNGGNTKVTLDKSGPHYFISGADGHCEKGQKVIVVVLSQRHRLVGVSPAPSPSEVEGPAVAPTSDASSFKAGYLVALGVLVGFMWM* 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6657069 6658020 + Vvi4g584 Vvi4g584 785363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g584 178 CDD OsENODL1_like 26 129 IPR041846 -
Vvi4g584 178 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
Vvi4g584 178 Gene3D - 24 133 IPR008972 -
Vvi4g584 178 PANTHER EARLY NODULIN-LIKE PROTEIN 3 10 174 - -
Vvi4g584 178 ProSiteProfiles Phytocyanin domain profile. 26 130 IPR003245 GO:0009055
Vvi4g584 178 PANTHER BLUE COPPER PROTEIN 10 174 IPR039391 GO:0009055
Vvi4g584 178 Pfam Plastocyanin-like domain 37 122 IPR003245 GO:0009055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g584 - - vvi:100249108 359.762