Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g589 ATGGCGGATCAATCTACCGATTCGAATCGGAAAACTCGAGTCTACCATCCATACCAAGACCTCCAGGTCCCCATCCAAAACCTCTACAACCTTCCCACCTCTCCCGAGTACCTCTTCGATGAAGAATCGCTTCATCAACGCCGCTCTTGGAGCGAGAATCTGCAATACTATACGGGGTCGGGTTACCTTTCCGGAGCCATAATCGGTGGCGCCAAGGGCTCCATCGAAGGGATCAGGGCGGCGGAGGCCGGCGACACGCTCAAACTCCGAGTCAACCGGGTTCTCAACTCCGGCGGCCAAACGGGTCGGAGGTTCGGCAACTCGATGGGCGTTCTTGGCCTTATTTTTTCCGGGTTGGAGAGCGGAATGATACACTGGAGAGACACCGATGATATGCTCAACAGCGTCTTCGCTGGTTTGGGCACCGGCGCTCTGTATCGAGCGGCTGCGGGGCCGCGCTCCGCCGTGATCGCTGGTGCTATCGGAGGTTTGGCTGCTGGCGCTGCCGTGGCCGGTAAGCAGGTCATGAAGCGATATGTTCCCATATGA 549 57.74 MADQSTDSNRKTRVYHPYQDLQVPIQNLYNLPTSPEYLFDEESLHQRRSWSENLQYYTGSGYLSGAIIGGAKGSIEGIRAAEAGDTLKLRVNRVLNSGGQTGRRFGNSMGVLGLIFSGLESGMIHWRDTDDMLNSVFAGLGTGALYRAAAGPRSAVIAGAIGGLAAGAAVAGKQVMKRYVPI* 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6751662 6752535 - Vvi4g589 Vvi4g589 785368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g589 182 PANTHER TIM23 3 182 IPR045238 GO:0022857
Vvi4g589 182 Pfam Tim17/Tim22/Tim23/Pmp24 family 56 165 - -
Vvi4g589 182 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 3 182 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g589 K17794 - vvi:100255976 331.643