Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g611 ATGGAGACAAAGCTACTAGTTTTTTCTCCTCAACTTCTCATTCTCCTTCTCTTCTCTTTTGCTGCTTTTCCTTCTCCTTCTTCTTCCAGACTTGCCTTCAACTTCTATGGAGCTTCATGTCCATCTGCTGAGTTTATAGTGAAAAACACAGTCAGATCAGCTTCCTCCTTTGACCCAACCATTCCTGGAAAGCTCCTTCGCCTGCTCTTTCATGACTGCATGGTAGAGGGTTGTGATGCATCTGTGCTGTTACAAGGAAATGATACTGAGAGAAGTGATCCAGCAAATGCCTCTCTTGGAGGATTTTCTGTTATAAATTCAGCAAAAAGAGTACTTGAAATCTTCTGTCCAGGAACTGTTTCTTGTGCTGACATTCTTGCTTTGGCAGCTAGGGATGCCGTCGAAATTGTTGGCGGACCGATGCTTCAGATTCCAACGGGAAGGAGGGACGGAAGGGCTTCTGTGGCTTCAGTTGTTAGATTCAACATTATAGACACAAGTTTTAGTATGGATGAGATGATGAAGCTCTTCTCTTCTAAAGGGTTGTCCTTAGATGACCTTGTCATCCTATCAGGAGCCCACACCATAGGATCAGCTCATTGCAGTGCATTCAGTGATAGGTTCCAAGCAGACTCAAAGGGGACACTGACCCGCATTGACACATCCTTAGACAAAGCTTATGCAAATGAGCTGAGGAAGAAGTCTCTTCCAATCAGATTCCGTCCTCTTTAG 732 44.4 METKLLVFSPQLLILLLFSFAAFPSPSSSRLAFNFYGASCPSAEFIVKNTVRSASSFDPTIPGKLLRLLFHDCMVEGCDASVLLQGNDTERSDPANASLGGFSVINSAKRVLEIFCPGTVSCADILALAARDAVEIVGGPMLQIPTGRRDGRASVASVVRFNIIDTSFSMDEMMKLFSSKGLSLDDLVILSGAHTIGSAHCSAFSDRFQADSKGTLTRIDTSLDKAYANELRKKSLPIRFRPL* 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7134441 7137026 + Vvi4g611 Vvi4g611 785390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g611 243 ProSiteProfiles Plant heme peroxidase family profile. 30 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 Gene3D - 31 173 - -
Vvi4g611 243 Gene3D Peroxidase, domain 2 174 239 - -
Vvi4g611 243 SUPERFAMILY Heme-dependent peroxidases 31 234 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vvi4g611 243 PANTHER PEROXIDASE 25-RELATED 13 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi4g611 243 PANTHER PEROXIDASE 18-RELATED 13 234 - -
Vvi4g611 243 Pfam Peroxidase 47 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g611 K00430 K18328 vvi:100249258 419.468