Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g631 | ATGCAGGCCAACTTTATGATCGGTCTTGGAAGCAAAGCTCGGGTGCCCATCATTTCATTTTCTGCAACAAGTCCTTCTCTTTCTTCGCTCCAGAGTCAATATTTTGTCCGAGCCACCCTAAATGACTCAGCTCAAGTACCAGCAATAAAGGCAATTGTCCAAGCCTTTGGATGGAGAGAAGTTGTGCTTATTTGCGTGGACAATGAGTATGGCAATGGAGTCATACCGTCTCTGACTAGTGCCTTGCAGGAGGTGGACACCCATGTGACCTACCGGAGCGCCATTCATCTATCGGCAACTGATGATCAAATCGTTAAAGAACTTTACAAGTTGATGACGATGTCAACTAGGGTTTTCATTGTGCATATGTTTACACCTCTTGGCTCCCGGCTTTTTACCAAAGCAAATGAGGTTGGAATGATGGAAGAAGGCTATGTTTGGATACTAACTGATGGGATGACTGACTTCTTGAGTACTTTGGACCCTTCAGCCATTGATTCCATGCAAGGGGTGTTGGGCGTCAAGCCTCATGTTCCAAGAACCAAAGAGCTTGACAGTGTTAAAATCAGATGGAAAAAGAAATTCCAAGAAGAATATCCAATCAATGAAATCTCTGAGCTGAACATTTTTGGACTCCGGGCATATGATGCTGCTTCTGCACTAGCCATAGCAGTTGAAAAACTTAGCGTGGGAAACTTCAGCTTCCAAAAGACTAATATTTCCAGAGATTCAATCAGTCTTGAGAGTATTAGAGTTTCCCCAATTGGACCAAATATTCTCCATTCACTATTAAGTACTCAATTCAGAGGCCTTACCGGACATTTTCAAATTGTAGATGGGCAACTACACTCATCAGCTTTCCAGATAGTTAATGTGAATGGTGAAGGGGAAAAAGGGGTTGGATTTTGGACACAAGAGAATGGAATTGTAAGAAGACCGAATTCTACTTCTAAGGTCAATCTAAGAGCCATTACATGGCCAGGAGAATCTACTTCTGTTCCTAAAGGTTGGGTGCTTCCTACCAACGGAAAGAAGTTGAAGATAGGAGTTCCAGTGAAGGAGGGTTTTAGTGAATTTGTGAAGGTGATGCGAGATCCTATCACTAATACAACAAAGGTCACTGGCTACTGCATTGCTATCTTCGATGCCGTAATGGCAACATTACCATATGCTGTTCCTTACGAATACGTTCCCTTTGAGACACCTGATGGAAATGCTGCTGGTAACTACGATGAATTGATATCTCAAGTATATTTTCAGAAGTATGACGCTGTGGTGGGAGATACTACTATTCTAGCGAACAGGTCCTTGTATGTAGACTTCACACTACCTTACACCGAGTCTGGCGTATCAATGATGGTGCCCATCATCGATAACAGAAGTAAAAGTGCATGGGTCTTTTTGAAGCCATTAACTTGGGACCTTTGGGTGACAAGTGCTTGTTTCTTTGTCTTCATTGGCTTTGTGATTTGGACTCTTGAACATCGAATAAATGAAGATTTCAGAGGGCCTCGTTCACATCAAGTTGGCACAATTTTCAGCTTCTCCTTCTCAACATTGGTGTCTGCTCAGAAGGAGAGAATTGTCAGCAACTTGGCTCGGTTCGTGGTGATCATATGGTTTTTTGTGGTGCTGATTCTTACTCAAAGTTACACGGCCAGCTTGACTTCGATGCTAACGGTTCAACAGCTCAAACCGACTATAACTGACATAAACGAGCTCATAAGAACAGGGCAGCGCGTGGGCTACCAAAATGGCTCCTTCATTCTTGCATTTTTGGAACGGATGAAATTCCATGAATCGAACCTTGTAATATACAATTCTCTTGAACAATTAGATGAATTATTTTCAAAGGGGAGCCAAAAAGGTGGCATTGCTGCTGCATTTGATGAAATCCCTTACATGAAGCTTTTTCTAGCAAAATATTGCTCCAAATATACTGCGGTTCAGCCAACGTACAAGTTCGATGGTTTTGGATTTGTCTTCCCAAAGCATTCGCCTCTGGTTTCTGACGTTTCAATGCAAATCTTAAATGTGACTGAGGGAGATCAAATGGCGAAAATTGAGCAAGCATGGTTTGGGCAGAATTCGAGTTGCCCAGGGCTCAACAGCTCGCTGTCTTCAGACAGCATCGGAGTCGATAGTTTTTGGGGCCTATTCCTTATTGCTGGAGTGGCTTCATCTGCAGCTCTCATCATACGCATGGCCACTTTCCTTTATGAAAACACAGATACTTTGGTACAATTGGATCCCCCAGCTTCAGTATGGAGAAAAATTAAAGCCTTGGCAACCCTCTTTGATAACAAGGACCTCAGCTCCCATAATTTCAGAAAAAGTGAAATGGGAGATAGAAGTGGCACCAATGGCATGGATGCAGCGACTGCCTCTCCAGCCACAAACTACCCGCCGAGTCCATCAAGCCTTTCAGTCCAAACACAGAGTAATTTTGCTTTCTCCAGAGACCAAGCAACACCTGCTTCCGAATATGGTGATCAAATGAGTCCAAATGGGCAGACACCTCCTGAGATAGCATTTGGTATCGAGCTTGCCAATTCAAAGCAAGAGCTGAAAGTACCTGAAGTAGTTCATATGGCCATGGCACAAAACACAACAATACCAGTTAAAGTGGGAGTGGTTCTTGACATGGATACATGGCTGGGGAAGATGGGTTTGAGTTGCATCTCCATGGCACTCTCAGACTTCTATGCTTATCATGGGCACTACAAGACTAGGCTGATTCCCAAAATCAGAGATTCCAAAAGAGATGTTGTGGGTGCAGCTGCAGCAGCTCTATATTTATTACAAAATGAGGAAGTTCAAGCCATCATAGGACCAGCATCCTCCCTGCAAGCCAACTTTGTCATTGGTCTCGGAGACAAGGCTCATGTGCCCATCATTTCATTTTCTGCAACTAGTCCTTCTCTTTCTTCGCTCCGGAGTCAATATTTTGTCCGAGCCACACTGAATGACTCAGCACAAGTACCAGCTATAAGGGCAATTGTCCAAGCCTTTGGGTGGAGACAAGTTGTGCTCATTTACTTGGACAACGAGTACGGAAATGGAGTTATACCGTATCTTACTGATGCCTTGCAAGAGATTGACACCCGTATCTCCTACAGGAGCGTCATTCATCCATTAGCCACAGATGATCAAATCCTCGAAGAGCTTTACAAGTTGATGACAATGCCAACCAGAGTTTTCATTGTACACATGTTTGCACCTATAGGCCCACGACTTTTTGTCAGAGCGAACGAGATTGGAATGATGGAAGAAGGTTATGTATGGATTCTAACTGATGGGTTAACTGATATCTTGGGTACTTTGGATCCATCTGTCATTGATTCAATGCAAGGAGTGTTGGGGGTGAAGCCTCATGTTCCAAGATCGAAAAAGCTTGAAAGTTTTAAAATCAGATGGAAAAGGGAAATCCAACAAGAATATCCAACAAATGAAAGCTTTGAGCTGAACATTTTTGGACTCTGGGCTTATGATGCTGCTTGTGGGCTAGCCATGGCAGTTGAAAAACTTGGGGCAACAAACTTCAGATTCCAAAAGTCTAATTTTTCCAGAAATTCAACCGATCTTGATACTGTAGGAGTCTCCCTAATTGGTCCAAATCTTCTCCAATCACTATTATATACTAGATTTAGAGGCCTCAGTGGAGATTTTCAAATTGTTAACAGGCAACTACAGTCATCAGCTTTTGAGGTAGTGAATGTGATCGGCAAGGGAGAAAGAGGGGTTGGATTTTGGACACCAGAGAATGGAACTGTAAGAAAGTTGGATTCTACTTCCAAGCCCAATCTAGGAACAATCGTATGGCCGGGAGAATCTCCCTCCATCCCTAAAGGTTGGGTCCTTCCAACCAATGGGAAGAAGTTGAGAATAGGAGTACCAGTCACCAAGGGTTTTGGTGAATTTGTAAAGGTGACGCGAGATCCTAGTAGTAACGCAACGAAGGTCAGTGGATTTTCCATAGCAGTCTTCGATGCAGTGATGGCAGCATTACCATATGCTGTTCCTTATGAGTACATTCCCTTCCAGACGCCTGATGGCAATCCAGCGGGTGATGACAACGATTTGATATATCAAGTATATCTCCAGAAGTATGATGCTGTGGTGGGAGCTATTACTATTCTAGCGAACAGGTCCTTGTATGTAGACTTTACACTACCTTACACAGAATCTGGGGTGTCAATGGTCGTGCCCACTATAGATGAAAGAAAAGAAAATGCATGGGTTTTCTTGAAGCCACTTACTTGGGACCTTTGGGTGACAAGCTTTTGTTTCTTCGTATTCATTGGCTTTGTGATTTGGGTTCTTGAACATCGAGTAAATAAAGACTTCAGAGGGCCTCGTTCATATCAAGTTGGCACTATCTTCTGGTTTTCATTCTCAACATTGGTGTTTGCTCAGAATGAGAGAATTGTCAGCAACTTGGCTCGGATTGTGATGATCGTGTGGTTTTTTGTGGTGCTAATTCTTACTCAAAGTTACACAGCCAGCTTGACTTCAATGTTAACAGTTCGACAACTCAACCCAACTATCACCGATACAAATGAGCTCATAAAGAAGGGGGAGCGTGTAGGTTGCCAATATGGCTCTTTCATTTATGAATTCTTGATCAAGTCGATGAAATTTGAAGAGTCCAAGCTTGTAAACTATAATTCAACAGAAGAACTGGATGAGTTATTTTCAAAAGGTGGAATTGCTGCTGCATTTGATGAAATCCCTTGCATTAAGATTTTCCTTGCAAAATATTGCTCCAAATACACTGCAGTCGGACCAATATACAAGTTTGATGGGTTTGGATTTGTCTTTCCAAAGGGTTCACCCCTTGTAGCGGATGTTTCAAGGAAAGTTTTAAGCGTGACCGAGGGAGCTAAAATGTCACAATTTGAGAAGGCATGGTTTGGGCAAATACCCAGTTGTCCAGAGCTCACCAGCTCAGTTTCTTCAAACAGCATCAGCCTTAATAGCTTTTGGGGCCTATTCCTCATTGCTGGAGTCACTTCATTCGTAGCTCTCATCACATGCATCACCATATTCCTTCATGAAAATAGAGAAGCCTTAATAAACTTGAATCCCCCATCTTCCAGATGGAGAAAAATTAAAGCCATGGCGACACTCTTTGATGAGAAAGATCTCAGGTCCCATACCTTTAGAAAAAGTGATCAACTTCCAGACAAGCAGCATCAAGGCCATGGATGCAGTTACAGCCTCGCCAGCTACACCAACTGCCCTCCAAGTCCATCAAGCCTTTTGATCCCAACACACAGCAATTTTGCTTTCTTCAGTGAACAAGGAACGCCGTCTTCTGGACATGGTGATCCAGTCAGTCCAAATCGACCGATGTCTCCACATATATTGTTTGAATATGAGCTTGCTAATATAAATCACGAGCAAATTAACAAGATGCCATGCCCCAAGATCCTCTCCAAGGGCGTGACGATCAATTCACACATCAAGCCCGAAAGCTCAAAGTGTAAATTGAATATTGTTGAGAATAATTCTAGAAGCTTTTCTTAG | 5529 | 42.94 | MQANFMIGLGSKARVPIISFSATSPSLSSLQSQYFVRATLNDSAQVPAIKAIVQAFGWREVVLICVDNEYGNGVIPSLTSALQEVDTHVTYRSAIHLSATDDQIVKELYKLMTMSTRVFIVHMFTPLGSRLFTKANEVGMMEEGYVWILTDGMTDFLSTLDPSAIDSMQGVLGVKPHVPRTKELDSVKIRWKKKFQEEYPINEISELNIFGLRAYDAASALAIAVEKLSVGNFSFQKTNISRDSISLESIRVSPIGPNILHSLLSTQFRGLTGHFQIVDGQLHSSAFQIVNVNGEGEKGVGFWTQENGIVRRPNSTSKVNLRAITWPGESTSVPKGWVLPTNGKKLKIGVPVKEGFSEFVKVMRDPITNTTKVTGYCIAIFDAVMATLPYAVPYEYVPFETPDGNAAGNYDELISQVYFQKYDAVVGDTTILANRSLYVDFTLPYTESGVSMMVPIIDNRSKSAWVFLKPLTWDLWVTSACFFVFIGFVIWTLEHRINEDFRGPRSHQVGTIFSFSFSTLVSAQKERIVSNLARFVVIIWFFVVLILTQSYTASLTSMLTVQQLKPTITDINELIRTGQRVGYQNGSFILAFLERMKFHESNLVIYNSLEQLDELFSKGSQKGGIAAAFDEIPYMKLFLAKYCSKYTAVQPTYKFDGFGFVFPKHSPLVSDVSMQILNVTEGDQMAKIEQAWFGQNSSCPGLNSSLSSDSIGVDSFWGLFLIAGVASSAALIIRMATFLYENTDTLVQLDPPASVWRKIKALATLFDNKDLSSHNFRKSEMGDRSGTNGMDAATASPATNYPPSPSSLSVQTQSNFAFSRDQATPASEYGDQMSPNGQTPPEIAFGIELANSKQELKVPEVVHMAMAQNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYAYHGHYKTRLIPKIRDSKRDVVGAAAAALYLLQNEEVQAIIGPASSLQANFVIGLGDKAHVPIISFSATSPSLSSLRSQYFVRATLNDSAQVPAIRAIVQAFGWRQVVLIYLDNEYGNGVIPYLTDALQEIDTRISYRSVIHPLATDDQILEELYKLMTMPTRVFIVHMFAPIGPRLFVRANEIGMMEEGYVWILTDGLTDILGTLDPSVIDSMQGVLGVKPHVPRSKKLESFKIRWKREIQQEYPTNESFELNIFGLWAYDAACGLAMAVEKLGATNFRFQKSNFSRNSTDLDTVGVSLIGPNLLQSLLYTRFRGLSGDFQIVNRQLQSSAFEVVNVIGKGERGVGFWTPENGTVRKLDSTSKPNLGTIVWPGESPSIPKGWVLPTNGKKLRIGVPVTKGFGEFVKVTRDPSSNATKVSGFSIAVFDAVMAALPYAVPYEYIPFQTPDGNPAGDDNDLIYQVYLQKYDAVVGAITILANRSLYVDFTLPYTESGVSMVVPTIDERKENAWVFLKPLTWDLWVTSFCFFVFIGFVIWVLEHRVNKDFRGPRSYQVGTIFWFSFSTLVFAQNERIVSNLARIVMIVWFFVVLILTQSYTASLTSMLTVRQLNPTITDTNELIKKGERVGCQYGSFIYEFLIKSMKFEESKLVNYNSTEELDELFSKGGIAAAFDEIPCIKIFLAKYCSKYTAVGPIYKFDGFGFVFPKGSPLVADVSRKVLSVTEGAKMSQFEKAWFGQIPSCPELTSSVSSNSISLNSFWGLFLIAGVTSFVALITCITIFLHENREALINLNPPSSRWRKIKAMATLFDEKDLRSHTFRKSDQLPDKQHQGHGCSYSLASYTNCPPSPSSLLIPTHSNFAFFSEQGTPSSGHGDPVSPNRPMSPHILFEYELANINHEQINKMPCPKILSKGVTINSHIKPESSKCKLNIVENNSRSFS* | 1843 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7856757 | 7897638 | + | Vvi4g631 | Vvi4g631 | 785410 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g631 | 1842 | Gene3D | - | 345 | 464 | - | - | |
Vvi4g631 | 1842 | Gene3D | - | 1293 | 1411 | - | - | |
Vvi4g631 | 1842 | CDD | PBP1_GABAb_receptor_plant | 1 | 313 | IPR044440 | - | |
Vvi4g631 | 1842 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 370 | 695 | IPR001638 | - | |
Vvi4g631 | 1842 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 1318 | 1640 | IPR001638 | - | |
Vvi4g631 | 1842 | Gene3D | - | 1201 | 1292 | - | - | |
Vvi4g631 | 1842 | Gene3D | - | 249 | 344 | - | - | |
Vvi4g631 | 1842 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 873 | 1739 | - | - | |
Vvi4g631 | 1842 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 1 | 788 | - | - | |
Vvi4g631 | 1842 | SUPERFAMILY | Periplasmic binding protein-like II | 321 | 696 | - | - | |
Vvi4g631 | 1842 | Gene3D | - | 991 | 1156 | - | - | |
Vvi4g631 | 1842 | Gene3D | - | 43 | 207 | - | - | |
Vvi4g631 | 1842 | Pfam | Ligand-gated ion channel | 1641 | 1670 | IPR001320 | GO:0015276|GO:0016020 | |
Vvi4g631 | 1842 | Pfam | Ligand-gated ion channel | 696 | 726 | IPR001320 | GO:0015276|GO:0016020 | |
Vvi4g631 | 1842 | Gene3D | - | 641 | 701 | - | - | |
Vvi4g631 | 1842 | Gene3D | - | 1585 | 1646 | - | - | |
Vvi4g631 | 1842 | CDD | GluR_Plant | 344 | 693 | - | - | |
Vvi4g631 | 1842 | Gene3D | - | 1412 | 1556 | - | - | |
Vvi4g631 | 1842 | Gene3D | - | 465 | 603 | - | - | |
Vvi4g631 | 1842 | SMART | GluR_14 | 345 | 695 | IPR001320 | GO:0015276|GO:0016020 | |
Vvi4g631 | 1842 | SMART | GluR_14 | 1293 | 1640 | IPR001320 | GO:0015276|GO:0016020 | |
Vvi4g631 | 1842 | CDD | PBP1_GABAb_receptor_plant | 875 | 1261 | IPR044440 | - | |
Vvi4g631 | 1842 | MobiDBLite | consensus disorder prediction | 789 | 810 | - | - | |
Vvi4g631 | 1842 | CDD | GluR_Plant | 1292 | 1638 | - | - | |
Vvi4g631 | 1842 | SUPERFAMILY | Periplasmic binding protein-like II | 1270 | 1640 | - | - | |
Vvi4g631 | 1842 | SUPERFAMILY | Periplasmic binding protein-like I | 9 | 337 | IPR028082 | - | |
Vvi4g631 | 1842 | PANTHER | GLUTAMATE RECEPTOR 2.9 | 1 | 788 | - | - | |
Vvi4g631 | 1842 | PANTHER | GLUTAMATE RECEPTOR 2.9 | 873 | 1739 | - | - | |
Vvi4g631 | 1842 | Pfam | Receptor family ligand binding region | 2 | 294 | IPR001828 | - | |
Vvi4g631 | 1842 | Pfam | Receptor family ligand binding region | 893 | 1241 | IPR001828 | - | |
Vvi4g631 | 1842 | SUPERFAMILY | Periplasmic binding protein-like I | 873 | 1285 | IPR028082 | - | |
Vvi4g631 | 1842 | MobiDBLite | consensus disorder prediction | 774 | 810 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g631 | K05387 | - | vvi:100264189 | 1934.07 |