Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g649 ATGATCGTGCCGATCATCGATAACAGAAGTAAAAGAGCATGGGTCTTTTTGAAGCCATTAACTTGGGACCTTTGGGTGACAAGCGCTTGTTTCTTTGTCTTCATTGGCTTTGTGATTTGGACTCTTGAACATCGAACAAATGAAGATTTCAGAGGGCCTCGTTCACATCAAGTTGGCACAATGTTCTGGTTCTCCTTCTCAACATTGGTGTTTGCTCAGAAGGAGAGAATTGTCAGTGACTTGGCTCGGATCGCGGTGATCATATGGTTATTTGTGGTGCTGATTCTTACTCAAAGTTACACAGCCAGCTTGACTTCAATGTTAACAGTTCAACAGTTCAACAGCTTAACCCAACTATCACTGATATAA 369 42.01 MIVPIIDNRSKRAWVFLKPLTWDLWVTSACFFVFIGFVIWTLEHRTNEDFRGPRSHQVGTMFWFSFSTLVFAQKERIVSDLARIAVIIWLFVVLILTQSYTASLTSMLTVQQFNSLTQLSLI* 123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8597275 8598256 + Vvi4g649 Vvi4g649 785428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g649 122 PANTHER GLUTAMATE RECEPTOR 2.9 1 115 - -
Vvi4g649 122 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 115 - -
Vvi4g649 122 Gene3D - 9 122 - -
Vvi4g649 122 Pfam Ligand-gated ion channel 22 115 IPR001320 GO:0015276|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g649 K05387 - vvi:100245134 215.312