Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g649 | ATGATCGTGCCGATCATCGATAACAGAAGTAAAAGAGCATGGGTCTTTTTGAAGCCATTAACTTGGGACCTTTGGGTGACAAGCGCTTGTTTCTTTGTCTTCATTGGCTTTGTGATTTGGACTCTTGAACATCGAACAAATGAAGATTTCAGAGGGCCTCGTTCACATCAAGTTGGCACAATGTTCTGGTTCTCCTTCTCAACATTGGTGTTTGCTCAGAAGGAGAGAATTGTCAGTGACTTGGCTCGGATCGCGGTGATCATATGGTTATTTGTGGTGCTGATTCTTACTCAAAGTTACACAGCCAGCTTGACTTCAATGTTAACAGTTCAACAGTTCAACAGCTTAACCCAACTATCACTGATATAA | 369 | 42.01 | MIVPIIDNRSKRAWVFLKPLTWDLWVTSACFFVFIGFVIWTLEHRTNEDFRGPRSHQVGTMFWFSFSTLVFAQKERIVSDLARIAVIIWLFVVLILTQSYTASLTSMLTVQQFNSLTQLSLI* | 123 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8597275 | 8598256 | + | Vvi4g649 | Vvi4g649 | 785428 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g649 | 122 | PANTHER | GLUTAMATE RECEPTOR 2.9 | 1 | 115 | - | - | |
Vvi4g649 | 122 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 1 | 115 | - | - | |
Vvi4g649 | 122 | Gene3D | - | 9 | 122 | - | - | |
Vvi4g649 | 122 | Pfam | Ligand-gated ion channel | 22 | 115 | IPR001320 | GO:0015276|GO:0016020 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g649 | K05387 | - | vvi:100245134 | 215.312 |