Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g659 ATGGTTCTTGTTCAAATCCCAATGTGTAATGAGAGGGAGGTGTATGAGCAGTCCATCTCTGCTGTCTGCCAAATTGATTGGCCAAAAGATCGCTTGCTGATCCAAGTTCTTGATGACTCTGATGATGAGAGCATTCAGTGTCTAATTAAAGCAGAAGTCTATAACTGGAGTCAGCAGGGTATCAACATAGTCTATCGGCATCGTTTGGTTAGAACCGGTTACAAAGCCGGGAATCTGAAGTCTGCCATGAGCTGTGACTATGTGAAGAATTATGAGTTTGTTGCGATTTTTGATGCAGATTTCCAGCCAAACCCAGATTTCCTTAAGCAGACGGTTCCACACTTTCAGGGCAATCCAGACTTGGGGTTGGTTCAAGCTAGATGGGCTTTTGTTAACAAGGATGAGAACTTGTTGACTCGGCTTCAAAACATTAATTTGTGTTTCCATTTTGAAGTGGAACAGCAGGTTAATGGGGTATTCCTAAATTTTTTTGGCTTTAATGGAACTGCTGGTGTTTGGAGAATCAAGGCTTTGGAGGATTCTGGAGGTTGGCTTGAAAGGACTACTGTAGAGGATATGGACATCGCTGTTCGAGCCCATCTGAATGGTTGGAAATTCATATTCCTCAATGATGTTAAGGTCCTCTGTGAAGTTCCTGAATCTTATGAAGCTTACAGGAAGCAGCAACATCGATGGCATTCTGGGCCTATGCAACTTTTCCGATTGTGTCTCCCAGCTGTCATAACTTCTAAGATATCAATATGGAAGAAAGCCAACATGCTACTACTGTTCTTCCTATTGAGAAAACTTATCCTTCCCTTCTATTCTTTTACATTGTTTTGCATAATTCTCCCTTTAACCATGTTTGTTCCTGAAGCAGAACTTCCTGTGTGGGTCATCTGTTATGTGCCTGTTTTTATGTCATTCCTCAACATTCTCCCTGCCCCAAAATCCTTCCCTTTCATTGTTCCCTACCTCCTCTTTGAAAACACCATGTCAGTGACCAAATTCAATGCGATGGTCTCTGGACTGTTCCAGTTGGGTAGCTCATATGAGTGGATTGTCACTAAGAAGGCCGGCCGAGCATCAGAATCTGACTTATTAGCTGCTGCAGAGAGGGACTCAAAGACAGTGAACCAACCCCTGATTCACAGAGGAGCTTCTGAGAGAAAGAGCTCACACTGGCCTTCCTCCTACTCACTGCCTCTGTGA 1212 43.48 MVLVQIPMCNEREVYEQSISAVCQIDWPKDRLLIQVLDDSDDESIQCLIKAEVYNWSQQGINIVYRHRLVRTGYKAGNLKSAMSCDYVKNYEFVAIFDADFQPNPDFLKQTVPHFQGNPDLGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVITSKISIWKKANMLLLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRASESDLLAAAERDSKTVNQPLIHRGASERKSSHWPSSYSLPL* 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8878294 8882271 + Vvi4g659 Vvi4g659 785438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g659 403 PANTHER - 1 391 - -
Vvi4g659 403 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 302 IPR029044 -
Vvi4g659 403 Pfam Glycosyl transferase family group 2 94 290 IPR001173 -
Vvi4g659 403 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 2-RELATED 1 391 - -
Vvi4g659 403 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 219 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g659 Vvi9g969 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g659 - - vvi:100245256 783.867