Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g695 | ATGGTGCAGTGCAGAAACTACATGTCCGCTGAGGACTGCTTGGCTTGCTTCGCCGATGCTCAGTCGCTCATCCGCAGATGCGGTGCTGCCAACGGCGCTCGCGTCATCTACGATGGCTGCTTCCTCAGGTATGAGAGCAGCAGCTTCTACGACCAAACCACTCTCGCTGGAAATGCTCCAATTTGTGGGAACGACACGGCATCGCAGGTGACTGCTTTTCAATCAGCAGTAGAAGGACTGATAGCAGATCTTGAAGTTGCAACACCCAGGATTAATCGTTTCTATGCGGCATATAAAATGGAAGTGGTTGGTGGTGGTGGTGCAACAGTGTATGGGGTGGCACAATGTGCTGAAACAGCCAGTCAGACTGCTTGCCAAGAATGCTTGCAAGTGGCAAAGAGCAATATAAACAGTTGTCTTCCCAGTAAAAACGGCCGGGCTATTGATGCTGGATGTTTCCTGAGGTACTCAGATGTGGCCTTCTTTGCTGACAACCAGACAACTAATATCACACCCTTCTTACAAAAAGGAGGTTCAAACAAGAAGAAAGCGATTATTGGAGGAGTGGTTGGAGGTGTAGGTATTGTTTTGATTATCGTAGTTTTGCTTTTATGGTATCGGACCTATCGGTCATCAAGAAAGGCAAAGCTGGCTTCTACAGGTGATTTATTAGGTGTGACAGAGTTGCAAGGCCCAGTGAATTACAGCTACAATGATTTGAAAACTGCAACCAGGATGTTCAGTGAAGAAAATAAACTTGGAGAGGGAGGATTTGGTGACGTCTATAAGGGTCATTTGAAGAATGGGAAAATTGTTGCTGTTAAGAAACTATTTATAGGTCAAACAGACGGGGCAAAGGCAAATTTCGAGAGTGAAGTAAAGCTTATAAGTAATGTTCATCATCGCAATCTCATCCGTCTTCTTGGATGTTGTAGCAAAAAATCAGAATTGCTTCTTGTGTACGAGTACATGGCAAATAGCAGCCTGGATAAATTCTTATTTGGAGAAAAGCGAGGGGCTCTCAACTGGAAACAACGTTTGAATATAATTGTTGGTATAGCGAGGGGTCTTGCGTATTTACATGAGGAGTTCCATGTGTGTATCATACACCGAGACATAAAACCTAACAATGTTCTTCTTGATGACGATTTCCAACCCAGAATTGCAGATTTTGGATTGGCAAGGCTTCTACCTGAGGACCAGACTCATGTTAGCACCAAATTTGCTGGAACATTGGGTTACACTGCACCTGAATATGCAATCCATGGACAGCTATCTGCGAAGGCTGATACCTACAGCTATGGTGTTGTAGTCCTTGAAATCATAAGCGGCCAAAGGTGCAACGAGATGAAGGTTGAACCTGTCACTGAATTCTTGCTTGAACGGGCATGGAAACTGTACGAGAATGACAATCACTTGGAGTTGGTGGATGAGAGCTTAGACCCTGAGGAATATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGCTCTGTTGTGCACTCAATCATCAGCTTCCATGAGGCCCACAATGTCTGAAATTGTTGTTATGCTATACAGCAAGGACGCACTTCAGCATGGTCCCCCAACCAGGCCCACCTTCATTTCTTCCAATAACAGAGCTGGCGGAGATACTTCCGCGTCCACTTGGGACTACGCTTCCAATGCCACTGCCTCTTTTTCTGGGGTCTCAGGTCGTTAA | 1701 | 45.21 | MVQCRNYMSAEDCLACFADAQSLIRRCGAANGARVIYDGCFLRYESSSFYDQTTLAGNAPICGNDTASQVTAFQSAVEGLIADLEVATPRINRFYAAYKMEVVGGGGATVYGVAQCAETASQTACQECLQVAKSNINSCLPSKNGRAIDAGCFLRYSDVAFFADNQTTNITPFLQKGGSNKKKAIIGGVVGGVGIVLIIVVLLLWYRTYRSSRKAKLASTGDLLGVTELQGPVNYSYNDLKTATRMFSEENKLGEGGFGDVYKGHLKNGKIVAVKKLFIGQTDGAKANFESEVKLISNVHHRNLIRLLGCCSKKSELLLVYEYMANSSLDKFLFGEKRGALNWKQRLNIIVGIARGLAYLHEEFHVCIIHRDIKPNNVLLDDDFQPRIADFGLARLLPEDQTHVSTKFAGTLGYTAPEYAIHGQLSAKADTYSYGVVVLEIISGQRCNEMKVEPVTEFLLERAWKLYENDNHLELVDESLDPEEYDAEEVKKIIEIALLCTQSSASMRPTMSEIVVMLYSKDALQHGPPTRPTFISSNNRAGGDTSASTWDYASNATASFSGVSGR* | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10121210 | 10125994 | - | Vvi4g695 | Vvi4g695 | 785474 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g695 | 566 | Pfam | Protein tyrosine and serine/threonine kinase | 250 | 517 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi4g695 | 566 | Gene3D | Transferase(Phosphotransferase) domain 1 | 324 | 527 | - | - | |
Vvi4g695 | 566 | Pfam | Salt stress response/antifungal | 1 | 46 | IPR002902 | - | |
Vvi4g695 | 566 | Pfam | Salt stress response/antifungal | 62 | 158 | IPR002902 | - | |
Vvi4g695 | 566 | ProSitePatterns | Protein kinases ATP-binding region signature. | 253 | 276 | IPR017441 | GO:0005524 | |
Vvi4g695 | 566 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 1 | 563 | - | - | |
Vvi4g695 | 566 | ProSiteProfiles | Gnk2-homologous domain profile. | 1 | 49 | IPR002902 | - | |
Vvi4g695 | 566 | ProSiteProfiles | Protein kinase domain profile. | 247 | 520 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g695 | 566 | Gene3D | Phosphorylase Kinase; domain 1 | 224 | 323 | - | - | |
Vvi4g695 | 566 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 1 | 563 | - | - | |
Vvi4g695 | 566 | CDD | STKc_IRAK | 253 | 518 | - | - | |
Vvi4g695 | 566 | SUPERFAMILY | Protein kinase-like (PK-like) | 229 | 520 | IPR011009 | - | |
Vvi4g695 | 566 | ProSiteProfiles | Gnk2-homologous domain profile. | 55 | 161 | IPR002902 | - | |
Vvi4g695 | 566 | SMART | serkin_6 | 247 | 520 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi4g695 | 566 | Gene3D | - | 58 | 161 | IPR038408 | - | |
Vvi4g695 | 566 | Gene3D | - | 1 | 49 | IPR038408 | - | |
Vvi4g695 | 566 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 368 | 380 | IPR008271 | GO:0004672|GO:0006468 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76630 | PF07714 | PK_Tyr_Ser-Thr | 8.50E-51 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g695 | - | - | vvi:100241075 | 1103.2 |