Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g729 ATGGTGGTGAAGGTGTATGGTGCAGTTATGACTGCATGCCCACAGAGGGTGTTGGCTTGCCTTGTAGAGAAGGGACTGGAGTTTGAGGTTGTCCATGTCGACCTCGACTTCGGCGAGCAAAAACGACCTGAGTTCTTAATTCGTCAGCCTTTTGGGCAAGTTCGAGTGATGGAGGATGGTGATTTCAGGCTTTTCGATTCGAGGGCAATTATAAGATACATTGTGGCCAAGTACGTGGATGAGGGTCCCAACCTAGTGGGAAGGAACTTGGAGGAGAGAAGTCTTGTGGATCAATGGTTAGAAGTGGAGGAAAACAATTTGAACCCTTTAATTTTCACAGTGGTTCTTCAGTTGGTAATCCTACCTCGGATGGGGGAGAAAGGTGACTTGACACTAGTTCGAAACTGCGAACAAAAGCTTGACAAGGTGTTTGATGCGTACGAGCAAAGGCTCTCCAAGAGTTCCTACCTTGGAGGAGATTCATTTACTCTTGCTGATTTGAGTCATCTTCCGGGCATAAGATATTTAGTGAATGAAGTTGGAATAGGGCACTTGATCACTGAGAGGAAGAATGTGAGTGCATGGTGGGAGAACATCTCCAATATGCCTGCTTGGAAGAAAGTCATGAACCTTGCTTCTTGA 642 46.11 MVVKVYGAVMTACPQRVLACLVEKGLEFEVVHVDLDFGEQKRPEFLIRQPFGQVRVMEDGDFRLFDSRAIIRYIVAKYVDEGPNLVGRNLEERSLVDQWLEVEENNLNPLIFTVVLQLVILPRMGEKGDLTLVRNCEQKLDKVFDAYEQRLSKSSYLGGDSFTLADLSHLPGIRYLVNEVGIGHLITERKNVSAWWENISNMPAWKKVMNLAS* 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11587679 11589305 - Vvi4g729 Vvi4g729 785508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g729 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Vvi4g729 213 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Vvi4g729 213 Gene3D - 87 209 - -
Vvi4g729 213 SUPERFAMILY GST C-terminal domain-like 82 210 IPR036282 -
Vvi4g729 213 Pfam Glutathione S-transferase, C-terminal domain 109 203 IPR004046 -
Vvi4g729 213 SFLD Main (cytGST) 4 200 - -
Vvi4g729 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vvi4g729 213 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Vvi4g729 213 PANTHER GLUTATHIONE S-TRANSFERASE F12 2 212 - -
Vvi4g729 213 Gene3D Glutaredoxin 2 86 - -
Vvi4g729 213 SFLD Glutathione Transferase (cytosolic) 4 200 IPR040079 -
Vvi4g729 213 CDD GST_C_Phi 91 209 IPR034347 -
Vvi4g729 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 212 - -
Vvi4g729 213 CDD GST_N_Phi 2 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g729 K00799 - vvi:100263347 429.483