Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g732 ATGGTGGTGAAGGTGTATGGTTCTGTTAGAGCTGCTTTCCCACAGAGAGTGTTGGCTTGTCTTATAGAGAAAGGAGTAGAGTTTGAGGTTGTGCATATGGACCTCGACTCCGGAGACCAAAAACGACCTCATTTCTTACTTCTTCCCCTTCCCTCCCTCTTCCAACAAAATAATTTATATTTAATTATATAA 192 41.15 MVVKVYGSVRAAFPQRVLACLIEKGVEFEVVHMDLDSGDQKRPHFLLLPLPSLFQQNNLYLII* 64
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11620378 11620570 - Vvi4g732 Vvi4g732 785511

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g732 63 Gene3D Glutaredoxin 2 59 - -
Vvi4g732 63 SUPERFAMILY Thioredoxin-like 2 46 IPR036249 -
Vvi4g732 63 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 47 - -
Vvi4g732 63 PANTHER GLUTATHIONE S-TRANSFERASE F11 2 47 - -
Vvi4g732 63 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 63 IPR004045 -
Vvi4g732 63 Pfam Glutathione S-transferase, N-terminal domain 1 46 IPR004045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g732 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - vvi:100232976 81.2629
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g732 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .