Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g815 ATGGCTGTCAATGCCGGCTTTTCTCTGCCCGCCATCTGTTCGCTATATTCATCATCAAAGCTCTCCACAATCCGACAGAGGCAGAATGGGAATCTGGTAATTGTCTGTGGATCTTCAAATGGGGGAGGGCTGGAGCTCAAATCCGCAGCTTCACGGAGGCAGAAGGGGAAGTTGGTAATTGTTTGTGCATCTTCTAATGGGCGAGGGCCGGAGTCCCTGGAGGATGGTGTCAAGAAGGTTGAGCGCATTCTTGAGGAGAAGCGCCGCGCTGAGTTATCAGCTCGGATTGCTTCTGGGGAGTTCACGGTGGCGAAACCTGGCTCTCCAGCTTTGTTGAAAAATAGTTTAGCAAAAGTGGGAATCCCTAGTGAGATTTTGGACTTTTTGTTTAAATGGATGGAAGTATCTGAAGATTATCCAAAGGTTCCTGAGGCAAAAGGGTCAATTAGAGCTGTTCGGAGTGAGGCTTTTTTCATCCCCTTATATGAGCTATACCTAACTTATGGTGGAATTTTCAGATTGACATTTGGTCCAAAGTCCTTTCTGATCGTTTCCGATCCTTCTATTGCTAAACATGTATTGAGGGACAACTCCAAGGCCTATTCAAAAGGTATCTTGGCCGAGATCCTAGAATTTGTAATGGGTAAGGGCCTTATCCCTGCTGATGGAGAGCTATGGCGTGTTAGACGACGTGCCATAGTCCCAGCATTGCATCAGAAGTATGTAGCAGCTATGATTAGCTTGTTTGGACAAGCTACAGATAGGCTCTGTAAGAAGTTAGATGCTGCTGCATCTGATGGGGAGGATGTAGAGATGGAATCACTTTTCTCTCATTTGACATTGGATATCATCGGCAAAGCAGTATTTAATTATGATTTTGATTCTTTGACAAATGATACTGGGATAGTTGAGGCTGTTTACGCTGTCTTGCGAGAAGCAGAAGATCGAAGTGTTGCACCAATTCCATTCTGGGAAATTCCAATTTGGAAAGACATTTCACCACGGCAGAGAAAGGTTAATGAAGCACTCAAGTTGATAAACAGTACACTCGATGATCTGATTGCAATATGCAAGAGGATGGTAGAAGAGGAAGAACTACAGTTTCATGAGGAATATATGAATGAAAAGGATCCTAGTATTCTTCACTTTCTTTTGGCATCAGGAGATGATGTTTCTAGCAAGCAACTTCGTGATGACTTGATGACATTGCTCATAGCTGGGCATGAAACATCTGCTGCAGTGTTAACATGGGCCTTTTATCTTCTCTCCAAGGAACCTAGTGTCATGTCTAAGCTCCAAAACGAGGTGGACTCTGTTTTAGGAGATCGGTTTCCAACTATTGAAGACATGAAGAAACTTAAGTACACAACTCGAGTGATCAATGAAGCATTGAGACTCTACCCACAACCACCTGTCTTGATCCGTCGTTCTCTTGAGAATGATGTGCTTGGAGGGTACCCAATAAAAAGGGGTGAAGATATCTTTATTTCTGTATGGAACCTACACCGGTGCCCAAAACATTGGGACGATGCAGATAAGTTTAATCCTGAAAGATGGCCTTTAGATGGACCAAATCCAAATGAGACAAATCAAAATTTCAGCTACCTGCCCTTTGGTGGAGGACCACGGAAATGTGTAGGCGATATGTTTGCTTCATTTGAGAATGTTGTAGCAGTTGCAATGCTTGTTCAACGGTTTAACTTTCAAATGGCAGTTGGAGCACCCCCAGTCAATATGACTACTGGTGCAACAATCCACACGACACAAGGGTTGAAGATGACGGTTACAAGAAGGACAAAACCTCCTATAGTACCCATATTAGAGACAACGATGCTGAAAGTGGATGAAACTGGTGGCGTTTCAAAAGAGAACCCAGTAATTAGTCAGAAAGGTGAAGTTTCTCCTGCTCCTTCATAG 1917 43.66 MAVNAGFSLPAICSLYSSSKLSTIRQRQNGNLVIVCGSSNGGGLELKSAASRRQKGKLVIVCASSNGRGPESLEDGVKKVERILEEKRRAELSARIASGEFTVAKPGSPALLKNSLAKVGIPSEILDFLFKWMEVSEDYPKVPEAKGSIRAVRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHVLRDNSKAYSKGILAEILEFVMGKGLIPADGELWRVRRRAIVPALHQKYVAAMISLFGQATDRLCKKLDAAASDGEDVEMESLFSHLTLDIIGKAVFNYDFDSLTNDTGIVEAVYAVLREAEDRSVAPIPFWEIPIWKDISPRQRKVNEALKLINSTLDDLIAICKRMVEEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTLLIAGHETSAAVLTWAFYLLSKEPSVMSKLQNEVDSVLGDRFPTIEDMKKLKYTTRVINEALRLYPQPPVLIRRSLENDVLGGYPIKRGEDIFISVWNLHRCPKHWDDADKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVAVAMLVQRFNFQMAVGAPPVNMTTGATIHTTQGLKMTVTRRTKPPIVPILETTMLKVDETGGVSKENPVISQKGEVSPAPS* 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15933939 15957362 + Vvi4g815 Vvi4g815 785594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g815 638 PANTHER - 94 601 - -
Vvi4g815 638 MobiDBLite consensus disorder prediction 617 638 - -
Vvi4g815 638 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 538 547 IPR017972 GO:0005506|GO:0016705
Vvi4g815 638 SUPERFAMILY Cytochrome P450 153 598 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS P450 superfamily signature 406 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS P450 superfamily signature 536 545 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS P450 superfamily signature 545 556 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PANTHER CYTOCHROME P450 FAMILY 4 94 601 - -
Vvi4g815 638 PRINTS E-class P450 group I signature 165 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS E-class P450 group I signature 395 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS E-class P450 group I signature 415 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS E-class P450 group I signature 457 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS E-class P450 group I signature 497 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS E-class P450 group I signature 535 545 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 PRINTS E-class P450 group I signature 545 568 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 Pfam Cytochrome P450 162 581 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g815 638 Gene3D Cytochrome P450 140 607 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g815 K15747 - vvi:100240996 1266.52