Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi4g87 | ATGCTTGAATTTTTCTTAAGAGATTGGGAATGGTCCCTCCAAGGTTTGATACAGATTGGGGTGTCCTTCATAAGGACACCCATGGCACCAGCCTTCTTCACAGTGTTGGCTATGCTAGGAGGACTTTTGGGCTACTTGTATGAACCCTATTGGAGGGTGAGAAGGGTACCAGGTCCACCAGTCTTCCCTCTTGTTGGGCACCTCCCCTTGATGGCCAAGTATGGTCATGATGTGTTCTCAGTCCTTGCCAAAAAATATGGTCCAATTTTCAGGTTCCATGTGGGTAGACAGCCCCTGGTGATTGTAGCAGATGCAGAGCTCTGTAGAGAAGTTGGAATAAAGAAATTCAAAGACATTCCCAACAGAAGCATTCCCTCTGCCATCTCAGCATCCCCTCTCCACCAAAAGGGTCTCTTCTTCACCAGGGATGCAAGGTGGTCAACAATGAGAAACACCATAATATCAGTCTACCAGCAATCTCACCTAGCCAACCTGGTGCCAACCATGCAAGCATTCATTGAACCAGCCTTTCGAAATCTCCCGTCTTCTGAAGAGGAAGATATCACTTTTTCCAATTTGTCCCTCAAACTGGCCACTGATGTAATTGGGCAAGCTGCATTTGGGGTTCATTTTGGTCTCTCCAAACCACCATCCAGCAATGAAGTTAAGAACAGTGATGAAGTATCAGAGTTCATCAATCAACATATTTACTCTACCACAAATCTTAAGATGGATCTATCAGGATCTTTCTCAATTATACTAGGCCTACTTGTCCCCATTCTCCAAAAACCAGTTCAACATATCCTTAAGAGAATACCTGGGACGATGGACTGGAAAATTTACCAGACTAACAAGAAACTGAGCAGCAGGCTTGATGAGATTGTTGCAAAGAGAATGAAGGACAAGGATAGAGGTTCCAAGGACTTCTTGTCTCTCATATTGAATGCAAGGGAATCAGAGAAAGCCATGAAGAATATTTTCACCTCAGACTACCTTAATGCAGTTACTTATGAACACCTACTTGCTGGGTCTGCAACAACATCCTTCACATTGTCTTCAACTATCTATCTGATTGCCGAGCATCCAGAAGTGGAGAAGAAGTTGCTTGCAGAGATTGACGGGTTCGGTCCGCCTGATCAGATGCCAACAGCTCATGATCTCCAGCACAAATTCCCCTATCTTGATCAGGCAAAGTCTCTTGCAATGAGGTTTTATACAGTTTCCCCATTAGTTGCAAGAGAAACATCTGCAGAAGTAGAGATTGGAGGCTATGTTCTTCCCAAGGGCACATGGATCTGGTTGGCACCTGGGGTTCTAGCAAAAGATCCAAAAAATTTCCCGGAACCAGACAAGTTCAAGCCAGAGAGGTTTGACCCAAATTGTGAGGAGGAGAAACAAAGGCATCCTTATGCTCTCATACCCTTTGGAATTGGTCCTCGAGCATGTCTAGGCCAGAAGTTCTCCTTACAAGAAGTAAAGCTTTCGCTGATTCATCTATACCAAAGATATGTCTTTCGCCATTCCCCAAACATGGAGAAACCTCTGGAACTTGAGTATGGCATAATTCTCAACTTCAAACATGCTGTCAAGCTCAGAGCCATCAAACGACATCCATGA | 1617 | 44.4 | MLEFFLRDWEWSLQGLIQIGVSFIRTPMAPAFFTVLAMLGGLLGYLYEPYWRVRRVPGPPVFPLVGHLPLMAKYGHDVFSVLAKKYGPIFRFHVGRQPLVIVADAELCREVGIKKFKDIPNRSIPSAISASPLHQKGLFFTRDARWSTMRNTIISVYQQSHLANLVPTMQAFIEPAFRNLPSSEEEDITFSNLSLKLATDVIGQAAFGVHFGLSKPPSSNEVKNSDEVSEFINQHIYSTTNLKMDLSGSFSIILGLLVPILQKPVQHILKRIPGTMDWKIYQTNKKLSSRLDEIVAKRMKDKDRGSKDFLSLILNARESEKAMKNIFTSDYLNAVTYEHLLAGSATTSFTLSSTIYLIAEHPEVEKKLLAEIDGFGPPDQMPTAHDLQHKFPYLDQAKSLAMRFYTVSPLVARETSAEVEIGGYVLPKGTWIWLAPGVLAKDPKNFPEPDKFKPERFDPNCEEEKQRHPYALIPFGIGPRACLGQKFSLQEVKLSLIHLYQRYVFRHSPNMEKPLELEYGIILNFKHAVKLRAIKRHP* | 539 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 915979 | 921064 | - | Vvi4g87 | Vvi4g87 | 784866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi4g87 | 538 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 27 | 536 | - | - | |
Vvi4g87 | 538 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 475 | 484 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi4g87 | 538 | Pfam | Cytochrome P450 | 57 | 518 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | SUPERFAMILY | Cytochrome P450 | 50 | 536 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | P450 superfamily signature | 342 | 359 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | P450 superfamily signature | 473 | 482 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | P450 superfamily signature | 482 | 493 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | E-class P450 group I signature | 197 | 215 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | E-class P450 group I signature | 331 | 348 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | E-class P450 group I signature | 351 | 377 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | E-class P450 group I signature | 435 | 459 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | Gene3D | Cytochrome P450 | 46 | 537 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi4g87 | 538 | PANTHER | THROMBOXANE-A SYNTHASE | 27 | 536 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi4g87 | K20771 | - | vvi:100243924 | 1026.93 |