Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g947 ATGAGGAAACTCTGTCCAAATTTTGATCGAGATGATGGCTTGGAGACCGTCCTTGAGGTCCCAATCCCAGAAGAAATGTTCAATAGCATGGGCAGCAACCTTGCTCTTCGCTGTCACAACATGCTCACCTGGATGAAGGCTCAAACTGCAGAGAAATGGTCGTCGCCCATCATCGCCGGACGTTTTAATGAGTTATCCTTTCTTCTCTACATTGTTGGATCCCCTCTTATTCCTCTTCAGGTCAGATTGGACAACTCCGTCCACCGTCCCATCAGAGATAGTTCCATTGAAGCTTCCACAGCCAAGTATATTGTACAACAGTATATAGCAGCAACAGGAGGGCAACCAGCGCTGAGCTCAGTGAACAGCATGTGTGCAATCGGACAGGTGAGGATCAGTGCATCAGAGTTTTACCAAAGCGACCTACACGTGAAGGTGGGTACTACTGAAGAGATCGGAGGATTTGTGCTTTGGCAAAAGAATCCGGATATGTGGTGGTTAGAGCTCGTTGTGTCAGGTTGCAAGGTGATATCTGGTAGCAATGGCAAGCTTTCATGGAGGCAGTGCTCAAACCAGCAATCACCCATCTCCAAGGGTGCCCCCAGACCCTTGCGTCGTTTTCTACAGGGGTTGGATCCGAGGTCCACAGCCAACCTATTTATTGACGCGGTCTGCATCGGGGAGAAAATAATAAACAACGAGGACTGTTTCATACTGAAGCTGGAGACGAGCAGGGCAGTACGGGAGGCACAAAGCAGCCCAAAGTTTGAAATCATCCACCACACAATCTGGGGGTATTTCAGCCAGAGGTCGGGCCTCCTCATGCAGTTTGAGGACTCGAGGCTGCTGAGGATGAACACGGAGGGGGACGACGGCGTGTTCTGGGAGACAAGCTCGGAATCAGTGATAGAGGACTACAGATACGTGGATGGAGTGAACATAGCCCACAGTGGTAAGACAGTGGTGACGGTGTTCAGATATGGATCACATTCCGCCAGTCACAAGAGGGAGATGGAAGAAACGTGGAGGATTGAAGAGGTGGATTTCAATATATGGGGTTTGTCCAATGATTTTTTTCTGCCTCCCCCCTGA 1092 49.82 MRKLCPNFDRDDGLETVLEVPIPEEMFNSMGSNLALRCHNMLTWMKAQTAEKWSSPIIAGRFNELSFLLYIVGSPLIPLQVRLDNSVHRPIRDSSIEASTAKYIVQQYIAATGGQPALSSVNSMCAIGQVRISASEFYQSDLHVKVGTTEEIGGFVLWQKNPDMWWLELVVSGCKVISGSNGKLSWRQCSNQQSPISKGAPRPLRRFLQGLDPRSTANLFIDAVCIGEKIINNEDCFILKLETSRAVREAQSSPKFEIIHHTIWGYFSQRSGLLMQFEDSRLLRMNTEGDDGVFWETSSESVIEDYRYVDGVNIAHSGKTVVTVFRYGSHSASHKREMEETWRIEEVDFNIWGLSNDFFLPPP* 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18049832 18052659 + Vvi4g947 Vvi4g947 785726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g947 363 Pfam Protein of unknown function (DUF620) 124 362 IPR006873 -
Vvi4g947 363 PANTHER BNAC02G43970D PROTEIN 1 356 - -
Vvi4g947 363 PANTHER LIPASE 1 356 IPR006873 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g377 Vvi4g947 ECH
Vvi4g947 Vvi18g927 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g947 - - vvi:104879139 742.651