Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g957 ATGTCTGACTTGGAGTTTTTTCTCCTCCTCCTTGCGTCAATCTCAGTTCCCCTTGTGATTCTCAATCTGATCAAAAGAAAGCAAAGCGGACTTAATCTACCTCCGGGAAACACGGGTTGGCCTTTTCTGGGTGAAACCATCGGCTATTTAAAGCCGTACTCGGCCACTTCAATAGGAGACTTCATGGAGCAACACATATCAAGGTTCGGAGAAATCTACAAGTCCAATCTGTTTGGCGAGCCAACCATAGTCTCAGCGGATTCTGGGCTGAACAGATTCATACTACAGAACGAAGGAAAATTGTTTGAATGCAGCTATCCCAGAAGCATAGGTGGAATTCTTGGGAAATGGTCCATGCTGGTTTTAGTTGGAGACATGCATAGAGACATGAGAACCATCTCCCTCAACTTCTTGAGCCATGGCAGGCTTAGGACTCATCTCCTACCAGAGGTGGTGAAGCACACTTTGCTTGTTCTAAGCTCTTGGAAGGAGAATTGTACATTTTCTGCTCAAGATGAAGCTAAGAAGTTTACCTTCAATCTGATGGCAAAACATATCATGAGCTTGGATCCCGGAAAGCCGGAGACTGAGCAGCTTAAGAAAGAGTATGTTACTTTCATGAAAGGAGTGGTATCTGCTCCTTTGAATTTCCCTGGAACTGCATACAGAAAAGCCCTACAGTCTCGGTCCACCATCTTAAAATTTATCGAGCTGAAGATGGAAGAGAGGATTCAGAAACTGAGGGGAGGAGGGTTTGAGAATATGGAGGATGACGATCTTCTTGGATGGGTGCTGAAGCATTCCAACCTTTCAACTGAGCAAATCCTGGACTTGGTACTGAGCTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTTTAGCTATCTACTTCTTGGAAGGCTGTCCCAACGCCGTTCAACAGCTAAGAGAAGAACACCTTGAAATTTCCAGGGCCAAGAAGCAATCAGGAGAGTTGGAATTGAGTTGGGAAGACTACAAAAAAATGGAATTCACTCAATGTGTTATTAGTGAGACACTGAGGCTTGGAAATGTGGTTAGGTTTCTACACAGAAAGGCCCTGAAAGATGTCCGGTACAAAGGGTATGACATTCCATGTGGGTGGAAAGTGCTTCCGGTGATTGCAGCAGTGCACTTGGATCCTTCCCTTTTCGACCAACCTCAACACTTCAATCCTTGGAGATGGCAGCAGAATAATGGTAACCGAGGAAATTCGACTAGCTGGAGCACAGCCACGAATCAAAACTTCATGCCATTTGGGGGAGGACCACGGCTATGTGCGGGCTCTGAATTGGCCAAACTGGAAATGGCGGTGTTCATCCACCATTTGGTTCTCAACTACAACTGGGAGTTGGTTGATAAGGATCAGGCTTTTGCCTTCCCATTCGTCGATTTTCCGAAGGGCCTACCCATCAAGGTCCGACACCACAATTTCACGTGA 1467 45.88 MSDLEFFLLLLASISVPLVILNLIKRKQSGLNLPPGNTGWPFLGETIGYLKPYSATSIGDFMEQHISRFGEIYKSNLFGEPTIVSADSGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRTISLNFLSHGRLRTHLLPEVVKHTLLVLSSWKENCTFSAQDEAKKFTFNLMAKHIMSLDPGKPETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALQSRSTILKFIELKMEERIQKLRGGGFENMEDDDLLGWVLKHSNLSTEQILDLVLSLLFAGHETSSVAIALAIYFLEGCPNAVQQLREEHLEISRAKKQSGELELSWEDYKKMEFTQCVISETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQQNNGNRGNSTSWSTATNQNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNYNWELVDKDQAFAFPFVDFPKGLPIKVRHHNFT* 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18166916 18171198 + Vvi4g957 Vvi4g957 785736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g957 488 SUPERFAMILY Cytochrome P450 28 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 Gene3D Cytochrome P450 23 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PANTHER BNAC01G23810D PROTEIN 62 483 - -
Vvi4g957 488 PANTHER CYTOCHROME P450 26 62 483 - -
Vvi4g957 488 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi4g957 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vvi4g957 488 Pfam Cytochrome P450 34 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g957 K09587 - vvi:100241065 988.793