Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g112 ATGGCTTTCAGCTTGATTAGGCTGTTGGTCTTGGATCTCATCGTGGCCGCCCTTATTCCGATCGCTCTGTGTCAGTCTGAGGCGCCGTCGCCGACGGCTGATTCCTGCAACGGCATCTTCTTGTCGTACGCGTACACCAGCGGAGCCAAAATCCCGCCGAATCTGAACTCGGATCCGACTGAGCAGCCCTACAGATTCGAGTCCACGCTCACTGTGCTCAACAATGGGCTCGAGGAGCTCAAGTCTTGGAGGGTCTTTGTGGGCTTTCAACATAAGGAGTATTTGGTGTCGGCTTCGGGGGCTGTGCTCGCCAACGGTACTAGTCTTCCAGCCACTGTTGGAGGCGGCGTCGTTTTTGCTGGTTACCCTTCGACGGATCTCAAGACGGCGATTGAGACCGCCGGCGACACGACCCAGATGCAGATTCAGGTCCAGTTTGTGGGGACGCAGTTCGGAGTGGGGTCGCCGAATGTGCCGATGCCGACGAATGTGTCGCTCGTTAACGATGGGTTTGTTTGCCCTAAACCCACTATGCAAGGGACAAGTGAGATGCAAGTTTGTTGCACAAAAGATTCAAACTACAAGTCAAACGTCTCCTCAGATGATGAGTTCCTGCCCCGCCAAAACGGAGATCTTACAATAATGTATGATGTGACCAGAACATATGAAAGCAGTTACTGGGCCCAGATTACAATCTCAAACCATAACCCTCTTGGTCGTCTCGATGATTGGAAGTTAAGCTGGGACTGGATGAAGGGTGAATTTATCAATAGCATGAAAGGGGCATATCCAGATATTGTTGATACGACTGACTGTATATTTGGTGAACAAGGCCAGTACTACCAGGATCTTGACTTCTCCAATGTATTGAATTGTGAAAGAAGGCCAACCATAATCGACCTGCCTCCAACAAAGGCCAATGACACTACACTCGGGTTGATCCCTTTCTGTTGCCGGAATGGTACAATCCTGCCACCAACAATGGACCCGAGTAAGTCAACTTCAGTATTCCAGATGAATGTCTACAAAATGCCCCCAGATCTCAACCGGTCGGAGCTGACCCCACCACAGAACTGGAATATCAGTGGGACACTCAACCCTGATTATCAATGCGGTTCTCCAGTGCGTGTGAGCCCAAGCGAGTTCCCTGATACTAGTGGCTTGCCATCAAATTCAACTGCCGTCGCCAGTTGGCAAGTGGTTTGCAACATCACACAGCCCAAGGGAGCAAGCCCCAAATGCTGTGTATCATTTTCTGCATACTATAATGAATCTGTCGTTCCCTGCAAAACCTGTGCATGTGGCTGCCCTAGCACCCCGAGCCAAACTTGTAGTACTACTGCTGCTGCTATTCTTCTTCCATCAGAGGCTCTTCTTGTTCCATTTGAGAATCGGACTGCTCTGACCAAAGCTTGGGCTGAACTTAAACACCTGACAATTCCAAATCCAATGCCCTGTGGCGATAATTGTGGTGTCAGCATCAACTGGCATTTATATACAGACTACAGCCGGGGATGGACTGCAAGGATTACGATCTTCAACTGGGGTGAAACTAGTTATGTTGATTGGTTTGCGGCAGTTGAAATGGACAAAGCAGCCCCTGGTTTTGAAAAAATGTACTCATTCAATGCAACTGCATTGGATGGTGTTAACAATACCATATTCATGCAGGGTATCGAAGGCTTGAACTATCTTGTGGCAGAAACAGACGCAGCCAACCCAAAGAAGGATCCTAGGGTGCCTGGGAAACAACAGTCAGTGATCTCGTTTACAAAGAAACCCACGCCTGGAATCAATGTGGCTGGTGGGGCTGGGTTCCCCAGTAAAGTATTCTTCAATGGGGAGGAATGCTCACTTCCATCCGTCCTTCCAACAAGCAGTAGTTACAAGAAGAGCCCAGCTATGACCATTTCAGTCCTCCTATTGATTGTAGTTCTTATGTTGATGCAGCAATAG 1956 49.03 MAFSLIRLLVLDLIVAALIPIALCQSEAPSPTADSCNGIFLSYAYTSGAKIPPNLNSDPTEQPYRFESTLTVLNNGLEELKSWRVFVGFQHKEYLVSASGAVLANGTSLPATVGGGVVFAGYPSTDLKTAIETAGDTTQMQIQVQFVGTQFGVGSPNVPMPTNVSLVNDGFVCPKPTMQGTSEMQVCCTKDSNYKSNVSSDDEFLPRQNGDLTIMYDVTRTYESSYWAQITISNHNPLGRLDDWKLSWDWMKGEFINSMKGAYPDIVDTTDCIFGEQGQYYQDLDFSNVLNCERRPTIIDLPPTKANDTTLGLIPFCCRNGTILPPTMDPSKSTSVFQMNVYKMPPDLNRSELTPPQNWNISGTLNPDYQCGSPVRVSPSEFPDTSGLPSNSTAVASWQVVCNITQPKGASPKCCVSFSAYYNESVVPCKTCACGCPSTPSQTCSTTAAAILLPSEALLVPFENRTALTKAWAELKHLTIPNPMPCGDNCGVSINWHLYTDYSRGWTARITIFNWGETSYVDWFAAVEMDKAAPGFEKMYSFNATALDGVNNTIFMQGIEGLNYLVAETDAANPKKDPRVPGKQQSVISFTKKPTPGINVAGGAGFPSKVFFNGEECSLPSVLPTSSSYKKSPAMTISVLLLIVVLMLMQQ* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1178874 1182753 + Vvi5g112 Vvi5g112 786254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g112 651 PANTHER COBRA-LIKE PROTEIN 7 12 651 - -
Vvi5g112 651 PANTHER COBRA-LIKE PROTEIN 7 12 651 - -
Vvi5g112 651 Pfam COBRA-like protein 226 405 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g112 Vvi7g355 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g112 - - vvi:100258513 1295.03