Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1358 ATGTGGTGGGTCGATGCCTTTGTGATTTTAACCATCATCTGTTCTAATCATGTCATTAAATCTGCCGCGGCTGACTATCACCTGCAGACGCGGCGGATTCTTCATCAACCCTTGTTTCCTCTCAATTCGTTTCCCCCAACTCCGTCGCCAGCGTCTTCCCCTCAAGCACATCCTCAGCAGCAACCTAAGTTTCCGTTCTCATCCTCATCTTCGAATAAGCAGCCATTTTTTCCCGCGTACGCATCTCCGCCCCCGCCTCCGTCTTCGACGGCTTTGGCCACATTTCCAGCGAATATTTCCTCCCTTATTTTCCCGCAGTCGTCTTCCCGGAAGGGGGTTTCGCCGAAGCTAGTGGCTATAGCGGTGGGGGTGTCGCTTGCCGCCGTCGCGCTCATCGCCATCGCTGCCGTATTGCTCTACCACCGTCGCCAGCCTAAAAGAAAAGACCCGAGATCCGACAGCCTCCGCCTATACCCGGCTAACACCGCCGTCTCCGACGGCATCCAGCACCACAAACAGCCGCGCAGCAGCATCTCAGGCACGAGCTCCGAGTTCCTCTACCTTGGTACGCTGGTAAACTCTCGCGGCGTCGACGACGATGCCGCAGCAAACTCCAGCAATGCCGGAACAAAACGGAGCGCGTCGGCCTCGCCGCCGTACCAGAAGCTCAGTTCGCCGGAACTCCGCCCTCTTCCGCCGCTTCCACGGCAGAACTTCCGGCATAGCTTCAGAAACGCCGACGTGGGCTCCTTTGGTGACGACGACGAGGACGAAGAGTTCTTTTCTCCGAGAGGGTCTTCCAGTCCAGTGGGCGCCGGATCGAGTTCCCGAAGAACGTTCCCGATGGTAGAAGCCGAGAATTATCGAAGCAGAAGCGTGGATTCTAGAACTCCATCGTACCCATCTTCTAACTCAGCTTCTCCGACGAGCTCTACTTCCAATAGCCCTTCTCCGCCATTGAATTCAAGTCCCGAAATCTCAAAATCGAAATTGCCCGTTTCCAACAGTGCTTCCCCTCCATTGAATTCGAGTCCCGAAGTCTCGAAACCAAAATCCCCCACTGCCACCATCAACTTCCCTGCTCCTCCACCGCTGCGACCTCCCCCGCCGCTGCCACGGCCCCCATCTGAACAGCCTCAGGGCATTGAAGCTCTTGAAAGGAATGGCGAAACCCCGAAACCGAAGCTGAAACCCTTGCATTGGGACAAGGTCAGAGCGAGCTCAGATCGAGCAATGGTGTGGGATCAGATGAAATCAAGCTCTTTTCAATTGAATGAGGAAATGATCGAGACATTGTTTATGGTGAATGCTTCAAATTTGACTCCAAAGGATAATTTGCGGCGACAGATTCTTCCAACCCCGAATCAGGAGAATCGGGTTCTTGATCCAAAAAAGTCTCAGAACATCGCAATTTTGTTGAGGGCACTTAATGTGACCATTGATGAAGTCTGTGAAGCCCTTTTGGAAGGCAATACAGACACACTGGGAACAGAGCTTCTTGAAAGTCTGCTAAAGATGGCTCCAACAAAAGAGGAAGAATGTAAACTGAAAGAATTTAAAGATGAGTCACCGTTCAAGTTAGGTCCTGCTGAAAGATTTCTAAGGGCTGTGCTTGACATACCCTTTGCATTTAAAAGGGTTGATGCAATGCTTTACATAGCCAATTTTGATTCAGAAGTCGAGTATCTCAAAAGGTCTTTTGACACTCTAGAGGCTGCTTGCGAAGAACTGAGGAACAGCAGAATGTTCTTGAAGCTTCTTGAAGCTGTACTCAAGACTGGGAACCGAATGAATGTTGGGACCAACCGTGGCGATGCACATGCCTTCAAGCTCGACACGCTCCTCAAGCTTGTTGATATTAAGGGCACTGATGGGAAAACCACCCTTCTGCATTTTGTTGTACAGGAAATCATCAGGGCTGAAGGAAGCTTGGCCTGCAAGTTGTTGCTGGGTTGA 1956 51.53 MWWVDAFVILTIICSNHVIKSAAADYHLQTRRILHQPLFPLNSFPPTPSPASSPQAHPQQQPKFPFSSSSSNKQPFFPAYASPPPPPSSTALATFPANISSLIFPQSSSRKGVSPKLVAIAVGVSLAAVALIAIAAVLLYHRRQPKRKDPRSDSLRLYPANTAVSDGIQHHKQPRSSISGTSSEFLYLGTLVNSRGVDDDAAANSSNAGTKRSASASPPYQKLSSPELRPLPPLPRQNFRHSFRNADVGSFGDDDEDEEFFSPRGSSSPVGAGSSSRRTFPMVEAENYRSRSVDSRTPSYPSSNSASPTSSTSNSPSPPLNSSPEISKSKLPVSNSASPPLNSSPEVSKPKSPTATINFPAPPPLRPPPPLPRPPSEQPQGIEALERNGETPKPKLKPLHWDKVRASSDRAMVWDQMKSSSFQLNEEMIETLFMVNASNLTPKDNLRRQILPTPNQENRVLDPKKSQNIAILLRALNVTIDEVCEALLEGNTDTLGTELLESLLKMAPTKEEECKLKEFKDESPFKLGPAERFLRAVLDIPFAFKRVDAMLYIANFDSEVEYLKRSFDTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGSLACKLLLG* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24253847 24266001 + Vvi5g1358 Vvi5g1358 787500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1358 651 MobiDBLite consensus disorder prediction 56 72 - -
Vvi5g1358 651 Coils Coil 560 580 - -
Vvi5g1358 651 MobiDBLite consensus disorder prediction 201 222 - -
Vvi5g1358 651 MobiDBLite consensus disorder prediction 47 72 - -
Vvi5g1358 651 SMART it6_source 386 650 IPR015425 -
Vvi5g1358 651 ProSiteProfiles Formin homology-2 (FH2) domain profile. 386 651 IPR015425 -
Vvi5g1358 651 PANTHER FORMIN-LIKE PROTEIN 2 18 644 - -
Vvi5g1358 651 Gene3D Formin, FH2 domain 384 647 IPR042201 -
Vvi5g1358 651 Pfam Formin Homology 2 Domain 390 639 IPR015425 -
Vvi5g1358 651 MobiDBLite consensus disorder prediction 201 381 - -
Vvi5g1358 651 PANTHER FORMIN-RELATED 18 644 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi5g1358 651 MobiDBLite consensus disorder prediction 292 355 - -
Vvi5g1358 651 MobiDBLite consensus disorder prediction 356 377 - -
Vvi5g1358 651 SUPERFAMILY Formin homology 2 domain (FH2 domain) 362 643 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1358 - - pper:18769652 626.32