Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1385 ATGCTGAGCAGCGCGACTCTCGACGTCTTCTATGACCTCCGCCGCCAGGAGTTCCAGCGGACGGTGAGATATCTGTACGGTCAAGCAGGATCACCGGTAAACGTGGGAGAGCAAATGTTTTTGACTGTAATGAACGTGATAACGAGCATGTTGTGGGGTGGGACGGTGAAGGGGGAAGAGAGAGCGAGCCTTGGGGCAGAGTTCAGGCGAGTGGTGGCAGCGATGACGGAGTTGATGGGGAAGCCCAATATATCTGATTTTTTTCCAGGATTGGCCCGGTTTGATTTGCAAGGCATTAGAAAACGGTTTGGAGAATGTGCTCTGAAGTTTGAAGGAATATTTGATTCAATTATCCAACAGAGAATGAAGATTGATAAAGAAGGTGGAAACGGAGGTGGGAAGGATTTTCTGCAGTTTCTATTGAGGCTCAAAGATGAAGGACACGCCAAGACGCCTTTGACAATGAACCACGTCAGGGCCCTACTCTTGGATATGGTGGTGGGTGGAACCGATACCACGTCTAACACAGTTGAGTTCGCCATGGCTGAAATGATGAACAAACCAGAGGTGATGAGAAAAGCACAACAAGAATTGGAGGTAGTGGTTGGTAGAGACAAGAAAGTAGAAGAATCCCACATCGGAAAACTGCCATATTTATATGCAGTCATGAAGGAAGTTTTGCGGTTGCACCCAGCGCTCCCTCTGTTAGTTCCTCATTGTCCAAGTGAATCATGCGTTGTGGGAGGTTATACCATTCCCAAGGGGGCTCGAGTCTTTGTTAACGTGTGGGCAATACACAGAGACCCATCAATTTGGAAATCCCCATTGGAGTTTGATCCGGAGAGGTTTTTGAGAGGGACATGGGACTACAGTGGAAAAGATTTCAGTTATTTTCCGTTTGGCTCAGGCAGAAGAATATGTGCAGGTATAGCGATGGCTGAAAGAATGGTGATGTTTTCTCTTGCGACACTTTTGCACTCTTTTGACTGGAAATTGAGGGAAGAGAAGTTAGATCTTTCGGAGAAGTTTGGAATTGTGTTGACAAAGAAGATGCCTCTTGTGGCCATCCCTACACCAAGATTATCTCACCCATTACTCTATGAGTATGATAGTTCCTCTAGTGGATACTTGGTGGCGTGGCATATGCATATTTTATGTTGA 1161 46.34 MLSSATLDVFYDLRRQEFQRTVRYLYGQAGSPVNVGEQMFLTVMNVITSMLWGGTVKGEERASLGAEFRRVVAAMTELMGKPNISDFFPGLARFDLQGIRKRFGECALKFEGIFDSIIQQRMKIDKEGGNGGGKDFLQFLLRLKDEGHAKTPLTMNHVRALLLDMVVGGTDTTSNTVEFAMAEMMNKPEVMRKAQQELEVVVGRDKKVEESHIGKLPYLYAVMKEVLRLHPALPLLVPHCPSESCVVGGYTIPKGARVFVNVWAIHRDPSIWKSPLEFDPERFLRGTWDYSGKDFSYFPFGSGRRICAGIAMAERMVMFSLATLLHSFDWKLREEKLDLSEKFGIVLTKKMPLVAIPTPRLSHPLLYEYDSSSSGYLVAWHMHILC* 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24490071 24496810 + Vvi5g1385 Vvi5g1385 787527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1385 386 Pfam Cytochrome P450 10 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 1 368 - -
Vvi5g1385 386 SUPERFAMILY Cytochrome P450 2 360 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 300 309 IPR017972 GO:0005506|GO:0016705
Vvi5g1385 386 Gene3D Cytochrome P450 1 362 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PANTHER OS08G0547900 PROTEIN 1 368 - -
Vvi5g1385 386 PRINTS E-class P450 group I signature 42 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS E-class P450 group I signature 157 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS E-class P450 group I signature 177 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS E-class P450 group I signature 261 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS E-class P450 group I signature 297 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS E-class P450 group I signature 307 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS P450 superfamily signature 168 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS P450 superfamily signature 221 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS P450 superfamily signature 298 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1385 386 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1385 - - vvi:104879497 746.888