Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g1385 | ATGCTGAGCAGCGCGACTCTCGACGTCTTCTATGACCTCCGCCGCCAGGAGTTCCAGCGGACGGTGAGATATCTGTACGGTCAAGCAGGATCACCGGTAAACGTGGGAGAGCAAATGTTTTTGACTGTAATGAACGTGATAACGAGCATGTTGTGGGGTGGGACGGTGAAGGGGGAAGAGAGAGCGAGCCTTGGGGCAGAGTTCAGGCGAGTGGTGGCAGCGATGACGGAGTTGATGGGGAAGCCCAATATATCTGATTTTTTTCCAGGATTGGCCCGGTTTGATTTGCAAGGCATTAGAAAACGGTTTGGAGAATGTGCTCTGAAGTTTGAAGGAATATTTGATTCAATTATCCAACAGAGAATGAAGATTGATAAAGAAGGTGGAAACGGAGGTGGGAAGGATTTTCTGCAGTTTCTATTGAGGCTCAAAGATGAAGGACACGCCAAGACGCCTTTGACAATGAACCACGTCAGGGCCCTACTCTTGGATATGGTGGTGGGTGGAACCGATACCACGTCTAACACAGTTGAGTTCGCCATGGCTGAAATGATGAACAAACCAGAGGTGATGAGAAAAGCACAACAAGAATTGGAGGTAGTGGTTGGTAGAGACAAGAAAGTAGAAGAATCCCACATCGGAAAACTGCCATATTTATATGCAGTCATGAAGGAAGTTTTGCGGTTGCACCCAGCGCTCCCTCTGTTAGTTCCTCATTGTCCAAGTGAATCATGCGTTGTGGGAGGTTATACCATTCCCAAGGGGGCTCGAGTCTTTGTTAACGTGTGGGCAATACACAGAGACCCATCAATTTGGAAATCCCCATTGGAGTTTGATCCGGAGAGGTTTTTGAGAGGGACATGGGACTACAGTGGAAAAGATTTCAGTTATTTTCCGTTTGGCTCAGGCAGAAGAATATGTGCAGGTATAGCGATGGCTGAAAGAATGGTGATGTTTTCTCTTGCGACACTTTTGCACTCTTTTGACTGGAAATTGAGGGAAGAGAAGTTAGATCTTTCGGAGAAGTTTGGAATTGTGTTGACAAAGAAGATGCCTCTTGTGGCCATCCCTACACCAAGATTATCTCACCCATTACTCTATGAGTATGATAGTTCCTCTAGTGGATACTTGGTGGCGTGGCATATGCATATTTTATGTTGA | 1161 | 46.34 | MLSSATLDVFYDLRRQEFQRTVRYLYGQAGSPVNVGEQMFLTVMNVITSMLWGGTVKGEERASLGAEFRRVVAAMTELMGKPNISDFFPGLARFDLQGIRKRFGECALKFEGIFDSIIQQRMKIDKEGGNGGGKDFLQFLLRLKDEGHAKTPLTMNHVRALLLDMVVGGTDTTSNTVEFAMAEMMNKPEVMRKAQQELEVVVGRDKKVEESHIGKLPYLYAVMKEVLRLHPALPLLVPHCPSESCVVGGYTIPKGARVFVNVWAIHRDPSIWKSPLEFDPERFLRGTWDYSGKDFSYFPFGSGRRICAGIAMAERMVMFSLATLLHSFDWKLREEKLDLSEKFGIVLTKKMPLVAIPTPRLSHPLLYEYDSSSSGYLVAWHMHILC* | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 24490071 | 24496810 | + | Vvi5g1385 | Vvi5g1385 | 787527 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g1385 | 386 | Pfam | Cytochrome P450 | 10 | 350 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PANTHER | CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED | 1 | 368 | - | - | |
Vvi5g1385 | 386 | SUPERFAMILY | Cytochrome P450 | 2 | 360 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 300 | 309 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi5g1385 | 386 | Gene3D | Cytochrome P450 | 1 | 362 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PANTHER | OS08G0547900 PROTEIN | 1 | 368 | - | - | |
Vvi5g1385 | 386 | PRINTS | E-class P450 group I signature | 42 | 60 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | E-class P450 group I signature | 157 | 174 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | E-class P450 group I signature | 177 | 203 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | E-class P450 group I signature | 220 | 238 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | E-class P450 group I signature | 261 | 285 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | E-class P450 group I signature | 297 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | E-class P450 group I signature | 307 | 330 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | P450 superfamily signature | 168 | 185 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | P450 superfamily signature | 221 | 232 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | P450 superfamily signature | 298 | 307 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi5g1385 | 386 | PRINTS | P450 superfamily signature | 307 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g1385 | - | - | vvi:104879497 | 746.888 |