Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g1386 ATGAAAAAAAGTACTGCTAAAGAAGAGGGGGCATCTGACAACGGAGAAAAGAAGGATTTTCTGCAGTTCCTTTTAGATCTCAAGGTGCAGGAAGACACTGAAACACCGATCACCATGACACAAATCAAGGCCTTGTTGATGGACATCTTGGTAGGCGGAACAGACACAACAGCCACAATGGTCGAGTGGGTGATGGCGGAGATGATTCGAAATCCGGTGATAATGACAAGGGCACAAGAAGAATTAACAAATGTTGTAGGGATGGGCAGCATTGTGGAAGAGTCACATCTGCCTAAATTACAGTACATGGATGCAGTTATCAAGGAGTCACTCCGATTACACCCAGCACTCCCACTCCTGGTCCCCAAGTGTCCAAGCCAAGATTGCACAGTGGGTGGGTACACTATAGCAAAAGGTACTAAGGTATTTTTAAATGTCTGGGCAATACATAGGGATCCACAGATTTGGGATAGTCCTTCTGAGTTCAAGCCAGAGAGGTTCTTGAGTGAGCCTGGTAGATGGGACTACACAGGCAACAATTTCCAATATCTTCCATTTGGATCAGGGAGAAGAATATGCGCAGGGATCCCTCTGGCAGAAAGAATGATAATATACTTGTTGGCATCACTTCTGCATTCATTCAATTGGCAGTTGCCGGAAGGTGAAGACCTTGACCTTTCAGAGAAGTTTGGGATTGTCCTAAAGAAGAGAACACCACTAATTGCTTTTATACAAGCTTTAGTTGTTCCAGCTTTTTCTTTCCCAGGAATCAGTTTCAATACTATGGTCTCTCATCATTTAGAGAGGGCTACTACTGCAATTTCCAGCTACTGGATATGGTGGTGGGAGGCTACCAGCAAGAAAGACCAAGTAAATCAAGCAGTTCTCACCGTTCTTATTGCCATATTTGCAACCTCATGGTACTTATGGGCATCTCTGAGGGCGAGGAAAAGAACAGCTCCATTGCCGCCTGGCCCTCGTGGCTTGCCAATAGTTGGATATCTCCCATTTCTGGGTTCCAACCTGCATCATTCATTTGCAGAATTGGCTGATATCTATGGTCCAATCTTCAAGCTCTGGCTTGGAAACAGGCTGTGTATAGTGTTAACCTCACCATCCCTTGCCAAGGAATTATTTGTAAGAGAGATGCTAAGTAACAAATATCCTTGA 1170 44.53 MKKSTAKEEGASDNGEKKDFLQFLLDLKVQEDTETPITMTQIKALLMDILVGGTDTTATMVEWVMAEMIRNPVIMTRAQEELTNVVGMGSIVEESHLPKLQYMDAVIKESLRLHPALPLLVPKCPSQDCTVGGYTIAKGTKVFLNVWAIHRDPQIWDSPSEFKPERFLSEPGRWDYTGNNFQYLPFGSGRRICAGIPLAERMIIYLLASLLHSFNWQLPEGEDLDLSEKFGIVLKKRTPLIAFIQALVVPAFSFPGISFNTMVSHHLERATTAISSYWIWWWEATSKKDQVNQAVLTVLIAIFATSWYLWASLRARKRTAPLPPGPRGLPIVGYLPFLGSNLHHSFAELADIYGPIFKLWLGNRLCIVLTSPSLAKELFVREMLSNKYP* 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24497334 24504338 + Vvi5g1386 Vvi5g1386 787528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g1386 389 Gene3D Cytochrome P450 1 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 Gene3D Cytochrome P450 307 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 SUPERFAMILY Cytochrome P450 12 243 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 SUPERFAMILY Cytochrome P450 317 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 Pfam Cytochrome P450 323 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 Pfam Cytochrome P450 12 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS E-class P450 group I signature 41 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS E-class P450 group I signature 61 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS E-class P450 group I signature 104 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS E-class P450 group I signature 145 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS E-class P450 group I signature 183 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS E-class P450 group I signature 193 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PANTHER CYTOCHROME P450 CYP736A12-LIKE 2 243 - -
Vvi5g1386 389 PANTHER CYTOCHROME P450 CYP736A12-LIKE 273 379 - -
Vvi5g1386 389 PRINTS P450 superfamily signature 52 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS P450 superfamily signature 105 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS P450 superfamily signature 184 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 PRINTS P450 superfamily signature 193 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi5g1386 389 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 186 195 IPR017972 GO:0005506|GO:0016705
Vvi5g1386 389 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 2 243 - -
Vvi5g1386 389 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 273 379 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g1386 - - vvi:109122654 486.493