Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g179 ATGGAAAGCTTGAGTTTCTTCGCTGGAGTAATAGGTAACATCATCTCAGTGCTGGTGTTTCTAGCTCCCATTGGAACGTTTTGGCGAATAGTAAAGCACCGATCGACCCAGGACTTTGAGAGCCTTCCCTACGTTTGCACTTTGTTGAACTCATCCTTGTGGACTTACTATGGAATTATCAAGCCCGGGGAAATACTTGTAGCTACTGTTAATGGTTTTGGTGTGGTTGTTGAAGCTGCCTATGTTACCTTATTCCTCATATACGCACCGGCAAAAATGAGGGCCAAAACCGTCGCTCTGGTCAGCCTCTTGGATGTGGGGTTTCTAGCTGCAGCAATTCTAGTGACTCGCTTGGCATTGCAAGGAGATACGCGGATTGATGCACTAGGGTTCATATGTTCCGGCCTCAACATTGTAATGTACGGCTCGCCTCTAGCTGCCATGAAAACAGTGGTGACAACCAAGAGCGTGGAGTTCATGCCATTCTTTCTCTCATTTTTCCTTTTCTTGAATGGAGGGATTTGGACCATCTACGCTGTGCTTGTCCGGGATTACTTCCTCGCTGTACCGAACGGGACGGGGCTTGTGCTTGGAACTGCCCAGTTAGTGCTGTATGCAATTTACAGAAACTCAAAACCATCCAACAAATTTTCCATAGAAGATGGGTCGCAAGAAGAGCACCTCATCGCATCTTCCAGCTGA 702 47.15 MESLSFFAGVIGNIISVLVFLAPIGTFWRIVKHRSTQDFESLPYVCTLLNSSLWTYYGIIKPGEILVATVNGFGVVVEAAYVTLFLIYAPAKMRAKTVALVSLLDVGFLAAAILVTRLALQGDTRIDALGFICSGLNIVMYGSPLAAMKTVVTTKSVEFMPFFLSFFLFLNGGIWTIYAVLVRDYFLAVPNGTGLVLGTAQLVLYAIYRNSKPSNKFSIEDGSQEEHLIASSS* 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1785714 1788540 + Vvi5g179 Vvi5g179 786321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g179 233 Pfam Sugar efflux transporter for intercellular exchange 8 92 IPR004316 GO:0016021
Vvi5g179 233 Pfam Sugar efflux transporter for intercellular exchange 128 212 IPR004316 GO:0016021
Vvi5g179 233 PANTHER RAG1-ACTIVATING PROTEIN 1 4 232 - -
Vvi5g179 233 Gene3D - 5 92 - -
Vvi5g179 233 Gene3D - 124 213 - -
Vvi5g179 233 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 232 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g179 Vvi7g464 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g179 K15382 - vvi:100255033 441.425