Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi5g214 | ATGGCTTATTTCGTCATCAACTACTCAAAGCTTCGTATTTGGGAATTCGTGGAGTACAGCAAGATGATATACTTGGATGGAGACATACAAGTATTCGAAAACATCGACCACCTCTTTGACTCACAAGACGGCCATTTCTATGCTGTGAAGGACTGTTTTTGTGAGCAGACATGGAGTCATTCCACCCAGTACAAAATTGGCTACTGTCAGCAGTGCCCGAACAAGGTGGAGTGGAAGGCCGAGCTCGGCCCTCCACCGCCGCTCTACTTCAACGCCGGCATGTTCGTCTTCGAGCCCAGTCTCTCTACCTACTCTAATCTCCTCGACACTCTCAAAGTCACCCCTCCTACTTCATTTGCCGAGCAGGACTTTCTGAACATGTTTTTCAGAGACGTCTACGTTCCAATCCCTTCTGAATACAACCTTGTGTTGGCCATGCTGTGGCGGCACCCCGAAAATGTGGACCTCACCAAAGCCAAAGTGATTCACTATTGTGCGGCGGGATCGAAGCCGTGGAGGTTCACAGGGAAGGAGGAGAACATGGACAGAGAAGATATAAAGGAGTTGGTGAGGAAATGGTGGGAAATATATGAAGATGAGACATTGGATTATAAGACAAGCTTGAAGGATCATGACGAGAAGTCAAGCCAGGATGCGCTTCTTACCGCAATGTGTGAAGCTGGGCTTGTGCCCATCAGGCCCGCTCCTCGAGCTGCATAG | 720 | 49.17 | MAYFVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDSQDGHFYAVKDCFCEQTWSHSTQYKIGYCQQCPNKVEWKAELGPPPPLYFNAGMFVFEPSLSTYSNLLDTLKVTPPTSFAEQDFLNMFFRDVYVPIPSEYNLVLAMLWRHPENVDLTKAKVIHYCAAGSKPWRFTGKEENMDREDIKELVRKWWEIYEDETLDYKTSLKDHDEKSSQDALLTAMCEAGLVPIRPAPRAA* | 240 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2171259 | 2173222 | + | Vvi5g214 | Vvi5g214 | 786356 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi5g214 | 239 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1 | 207 | IPR029044 | - | |
| Vvi5g214 | 239 | PANTHER | HEXOSYLTRANSFERASE | 1 | 239 | - | - | |
| Vvi5g214 | 239 | PANTHER | GLYCOGENIN SUBFAMILY MEMBER | 1 | 239 | - | - | |
| Vvi5g214 | 239 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 3 | 205 | IPR029044 | - | |
| Vvi5g214 | 239 | Pfam | Glycosyl transferase family 8 | 5 | 174 | IPR002495 | GO:0016757 |
Event-related genes
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi5g214 | K18819 | - | vvi:100261424 | 509.605 |