Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g225 ATGGAAGAGACCTTTGTACCATTTCGCGGAATCAAGAATGATCTTCAAGGGAGGCTATTGTGTTACAAGCAAGACTGGACTGGTGGTCTCAGGGCAGGCTTCAGGATTTTGGCCCCCACCACATACATATTTTTTGCTTCAGCAATTCCAGTTATTTCCTTTGGAGAGCAGTTGGAGAAGAATACTGATGGGGTTCTCACGGCAGTTCAAACCTTAGCTTCTACCGCCTTGTGTGGAATTATCCACTCCATCATAGGAGGCCAGCCTTTGCTGATTCTTGGAGTGGCGGAGCCAACTGTACTAATGTATACATTCATGTTCAACTTCGCTAAAGATAGACCAGATTTGGGACCAAAGCTCTTTCTAGCATGGACTGGATGGGTATGTGTGTGGACTTCAGGCTTACTTTTCCTTCTGGCCATCTTAGGAGCTTCCTCCATTATCAATAGGTTCACTCGTATCGCAGGGGAACTGTTTGGCCTGCTTATTGCAATGCTGTTTATGCAGGAAGCTATCAAAGGACTCATAGATGAGTTTCGCATACCAGGAAGAGAAAGTCCGACATTGACAGAATTTCAACCTTCGTGGAGGTTTGCTAATGGGATGTTTGCCCTGGTTCTGTCATTTGGCCTCTTTCTTACTGCGTTAAGAAGCCGAAAAGCGAGGTCTTGGCGTTATGGGTCTGGTTGTCTTCGAGGTTTCATAGCAGATTATGGTGTGCCATTAATGGTTCTGGTGTGGACAGCTGTTTCCTATATACCAGCTGGAAGTATTCCAAAAGGGATCCCACGGCGTCTCTTCAGCCCAAATCCATGGTCACCAGGCTCATATGAGAATTGGACCATCATAAAGGACATGCTGAATGTGCCAGTCCTATATATAATTGGAGCTTTTATTCCAGCAACTATGATTGCTGTACTTTACTATTTTGACCACAGTGTAGCATCTCAACTTGCTCAACAAAAAGAATTCAATCTGAGAAAGCCACCTTCTTTCCATTATGACTTACTTCTTTTGGGTTTCATGGTCATATTGTGTGGTCTCATTGGAATCCCTCCAGCAAATGGTGTCATTCCACAATCTCCAATGCATACCAAAAGTTTGGCTACACTTAAGCATCAGTTGCTTCGCAACCGACTTGTGGAAACAGCACGTAAATGCATCAGGGAGAATTCAAGCTTGGGACAAATGTATGAAAGCATGCAAGAAGCTTATCAACATATGCAGACTCCATTGGTTTACCAGGAACCCTCAGCTCTGGGACTAAAAGAATTGAAAGATTCAACTATTCAATTGGCTTCAAGCATGGGGAATATGGAAGCCCCAATTGATGAGACTCTGTTTGATATTGAGAACGAGATTGATGACCTATTACCTGTTGAGGTGAAAGAACAGCGGCTCAGCAACTTGCTTCAGGCCATAATGGTTGGAGGATGTGTTGCAGCCATGCCTTTCCTCAAGAAGATCCCAACATCAGTACTCTGGGGATACTTTGCCTTCATGGCTGTTGAAAGCTTACCTGGTAACCAGTTCTGGGAGCGGATTTTATTACTCTTTACGGCACCAAGTAGAAGATACAAAGTTTTGGAGGACTACCATGCAACTTTTGTGGAAACCGTTCCTTTCAAGACAATTGCAATGTTTACAATTTTCCAGACTGCCTACTTGCTTGTTTGTTTTGGGATTACTTGGGTTCCTATTGCTGGAGTTCTGTTCCCTCTAATGATCATGCTTTTGGTTCCTGTGAGACAATACATTTTGCCCAAGTTTTTCAAAGGGGCACATCTTCAAGATTTAGATGCCGCAGAATATGAAGAGGTTCCTGCTTTATCATTCAACCTCACGAGTGAGAGGGAGCTGAGTAGGAGAAGTTCATTTGCAGACCATGGAGAGGTTTTAGATGGGATCATTACTAGAGGCAGGGGAGAGATTAGACGTACATGTAGTTTGAAAATGACAAGCTCCACTGCAATGCCATCCAAAGATTTCAAAAGTACAAAGAGCTTCTCAGACAGGGTATGCAGCCCTCGGATAACTGAACTGAGAGGGATTCGAAGTCCGCGATTTGGTGGAAGAGGACCATTCAGTCCAAGAACGGGAGAAGCAAGACAGTCCAATTTAGGAAAAAGTGGTCAGAATTCAGATATAAACTAG 2154 43.83 MEETFVPFRGIKNDLQGRLLCYKQDWTGGLRAGFRILAPTTYIFFASAIPVISFGEQLEKNTDGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGPKLFLAWTGWVCVWTSGLLFLLAILGASSIINRFTRIAGELFGLLIAMLFMQEAIKGLIDEFRIPGRESPTLTEFQPSWRFANGMFALVLSFGLFLTALRSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAVSYIPAGSIPKGIPRRLFSPNPWSPGSYENWTIIKDMLNVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVETARKCIRENSSLGQMYESMQEAYQHMQTPLVYQEPSALGLKELKDSTIQLASSMGNMEAPIDETLFDIENEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPFLKKIPTSVLWGYFAFMAVESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIAMFTIFQTAYLLVCFGITWVPIAGVLFPLMIMLLVPVRQYILPKFFKGAHLQDLDAAEYEEVPALSFNLTSERELSRRSSFADHGEVLDGIITRGRGEIRRTCSLKMTSSTAMPSKDFKSTKSFSDRVCSPRITELRGIRSPRFGGRGPFSPRTGEARQSNLGKSGQNSDIN* 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2350352 2356081 - Vvi5g225 Vvi5g225 786367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g225 717 Gene3D Helical hairpin bin 18 60 - -
Vvi5g225 717 PANTHER ANION EXCHANGE PROTEIN 1 704 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi5g225 717 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Vvi5g225 717 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016021
Vvi5g225 717 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016021
Vvi5g225 717 PANTHER BORON TRANSPORTER 3-RELATED 1 704 - -
Vvi5g225 717 MobiDBLite consensus disorder prediction 680 717 - -
Vvi5g225 717 MobiDBLite consensus disorder prediction 699 717 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g225 Vvi7g446 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g225 K24194 - vvi:100252933 1379.0