Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g24 ATGGCTTATTACGTCATCAACTACTCAAAGCTTCGTATTTGGGAATTCGTGGAGTACAGCAAGATGATATACTTGGATGGAGACATACAAGTATTCGAAAACATCGACCACCTCTTTGACTCACAAGACGGCCATTTCTATGCTGTGAAGGACTGTTTTTGTGAGCAGACATGGAGTCATTCCACCCAGTACAAAATTGGCTACTGTCAGCAGTGCCCGAACAAGGTGGAGTGGAAGGCCGAGCTTGGCCCTCCACCGCCGCTCTACTTCAACGCCGGCATGTTCGTCTTCGAGCCCAGTCTCTCTACCTACTCTAATCTCCTCGACACTCTCAAAGTCACCCCTCCTACTTCATTTGCCGAGCAGGACTTTCTGAACATGTTTTTCAGAGACGTCTACGTTCCAATCCCTTCTGAATACAACCTTGTGTTGGCCATGCTGTGGCGGCACCCCGAAAATGTGGACCTCACCAAAGCCAAAGTGGTTCACTATTGTGCGGCGGGATCGAAGCCGTGGAGGTTCACAGGGAAGGAGGAAAACATGGAGAGAGAAGATATAAAGGAGTTGGTGAGGAAATGGTGGGAAATATATGAAGATGAGACATTGGATTATAAGACAAGCTTGAAGGATCATGATGACGAGAAGCCAAGCCAGGATGCGCTTCTTACCGCAATGTGTGAAGCTGGGCTTGTGCCCATCAGGCCCGCTCCTCGAGCTGCATAG 723 49.1 MAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDSQDGHFYAVKDCFCEQTWSHSTQYKIGYCQQCPNKVEWKAELGPPPPLYFNAGMFVFEPSLSTYSNLLDTLKVTPPTSFAEQDFLNMFFRDVYVPIPSEYNLVLAMLWRHPENVDLTKAKVVHYCAAGSKPWRFTGKEENMEREDIKELVRKWWEIYEDETLDYKTSLKDHDDEKPSQDALLTAMCEAGLVPIRPAPRAA* 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 249312 251248 - Vvi5g24 Vvi5g24 786166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g24 240 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 206 IPR029044 -
Vvi5g24 240 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 240 - -
Vvi5g24 240 PANTHER HEXOSYLTRANSFERASE 1 240 - -
Vvi5g24 240 Pfam Glycosyl transferase family 8 3 174 IPR002495 GO:0016757
Vvi5g24 240 SUPERFAMILY Nucleotide-diphospho-sugar transferases 3 204 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g24 Vvi14g69 ECH
Vvi5g24 Vvi7g437 ECH
Vvi5g24 Vvi14g68 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g24 K18819 - vvi:100260126 513.072