Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g267 ATGTTTGTGGGCGCAGTCGCTGCTGCTGCAAATGGGGTATCCACGCCTCTTATGACCATACTCTTTGGAGATGTAATCAATTCTTTTGGAAAAGACTCGAACTCCAAAGATATGGTTCATGAAGTTTCCAAGGTTTCTCTGAAGTTTGTGTACTTAGCAATTGGGACTGGAGTTGCATCATTTCTTCAGGTGACTTGCTGGATGCTCACAGGTGAGAGACAGGCGGCACGAATAAGAAGTTTGTACTTGAAAACCATATTGAGGCAAGATGTTGGCTTCTTTGATAAGTTCACTAATGCTGGAGAAGTTGTTGGGAGGATGTCTGGTGACACGGTTTTTATCCAAGATGCCATGGGTGAGAAGGTTGGAAAGTTTATACAGTTGATGGCAACATTCTTGGGAGGCTTTATTGTAGCTTTCTGCAAGGGGTGGCTTCTCACCCTTGTCATGTTATCATGTTTTCCACCTCTCGTCATCGTCGGTGCTTTCACGACCATGTTTATAACCAAGATGGCATCCCGCGGACAAGCTGCATATTCAGTTGCAGCAGTTGTAGTAGAACAGACAATTGGCTCAATCAGAACTGTTGCTTCTTTTACTGGGGAAAAGCAAGCCATAGCCAAATACAACCAGTCTTTGTCCAAAGCCTACACATCCGGTGTGCAAGAGTCCGTGCTTTCAGGGCTAGGTTTTGGATTATTTATGTTTGTCTTATTCGCAAGTTATGCTTTGGCCATGTGGTTTGGTTCCAAAATGATAATTGATAAAGGATACACAGGAGGGGCTGTCATGAATATAATTTTTTCTGTGGTGGCTGGCTCCATGTCTCTAGGGCAGGCATCTCCATGCTTGAGTGCATTTGGCTCTGGACAAGCTGCAGCATTTAAGATGTTTGAGACAATAGAAAGAAAGCCAGAAATAGATGCCTACAGCAGTGATGGACAGAAATTGGATGATATTCAGGGCGATGTGGAACTAAGGGATGTTTATTTCAGTTATCCAACAAGGCCAGATGAACAAGTATTTAAAGGATTCTCACTTTCAATACCTAGTGGTACAACTGCAGCCTTGGTTGGAGAGAGTGGAAGTGGGAAATCGACTGTGATCAGTTTGATAGAGAGGTTTTATGACCCGCAAGCTGGTGAAGTTCTTATAGATGCTACTATAGAAGAAATAAGGGCTGCTGCTGAGCTTGCCAATGCTTCTAAATTCATAGATAAACTCCCTCAGGGACTAGACACACTGGTTGGTGAACATGGAACTCAGTTGTCCGGGGGCCAAAAGCAGAGAGTTGCTATAGCCAGAGCAATTCTCAAGGACCCGAGAATTCTACTTCTAGATGAAGCTACAAGTGCCCTTGATGCAGAATCTGAAAGGGTTGTGCAAGAGGCATTGGACAGAGTTATGATCAACCGTACTACCATCATCGTAGCCCATCGTTTGAGTACAGTGAGGAATGCAGACATGATTGCTGTTATTCATCGAGGAAAAATTGTTGAAAAAGGAGCACACTCTGAGCTAATCAAGGATCCTGATGGGGCATACAGTCTGCTTATAAGGTTGCAAGAAATTAGCTCAGAACAGAATGCTTCACATGATCAGGAAAAACCAGAGATCTCTCATCCCCCTAAAGTCCCGCTTGCTGCAGTTGTCAATGGTGCAGATGCTAGATTTTGGGCACTGATGATAAGAGCAATGTGCTTTGAGAAAGTAGTTTACATGGAAGTAAATGCCCTCTCTTTGCTTGTACAGAACAGTGCAGCAATGATTGCTGGCTTGGTTATTGCCTTTGTAGCAAACTGGAAAATGTCTTTTATCATCCTTGTGTTGCTACCTCTATTTGGAGCTAATGGATACGTTCAAGTGAAGTTCCTGAAAGGTTTTACTGCAGATGCAAAGAAAAAGTATGAGGAAGCAAGTCAAGTAGCCAATGATGCAGTTGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAAGTGATGCAGCTATACCAGCAGAAATGTGAAGGCCCCATGAATGCAGGGATAAGGGAAGGGTTAGTTGGTGGGGTTGGTTATGGGGTATCCTTCTTCTTGCTGTTTGCTGTCTATGCTACTGCCTTTTATGCTGGCGCTCGACTGGTTGATGTTGGGCAGGCAACATTCGCTGAGGTTTTTCAGGTTTTCTTTGTTCTCACCCTGGCAGCTGTTGGAGTCTCTCAATCAAGCTCCCTCGCTCCTGATACAGGCAAAGCCAAGAATGCAGCTGCTTCAATATTTGCGATTCTTGACCGTGAATCAAAAATAGACTCTAGTGATGAATCAGGAACAACATTAGAAAATGTTAAAGGAGAAATTGAGTTTCACCATGTCAGTTTCAGATATCCCACTAGACCAGACATACAGATTTTCCGTGATCTTTGCTTGGCAATTCACTCTGGCAAGACAGTTGCTCTGGTCGGAGAAAGTGGGAGTGGTAAATCAACAGCAATCTCACTGTTGCAGAGATTTTATGACCCGGATTCAGGTCATATCACTCTGGATGGAGTAGAGATCCAAAAGCTACAGTTGAAGTGGTTCAGGCAGCAAATGGGGAATGCAACAGAAGCAGAAATTTCAGCTGCAGCAGAATTAGCAAATGCCCACAAGTTCATCAGTGGTTTACAACAGGGCTATGATACAACTGTTGGAGAGAGAGGAATTCAGTTGTCTGGAGGACAGAAACAAAGAGTGGCAATTGCTCGGGCTATTGTGAAGGATCCAAAGATACTACTCTTAGATGAAGCTACCAGTGCTCTTGATGCTGAATCTGAAAGGGTGGTTCAGGATGCACTGGACCGAGTTATGGTGAACAGAACCACACTAGTTGTGGCTCATCGGTTGTCCACGATCAAGGGTGCAGACTTAATTGCTGTGGTTAAAAATGGAGCCATTGCAGAGAAAGGAAAGCATGAGACTTTAATTAACATTAAGGATGGAATTTATGCCTCATTGGTAGCACTGCATATGAGTGCTTCATCTTATGCTTGTAGTTTTCCACTGAACCAATCTTTCAATCTTTTATCATTCCTTACTGATTCAACAACTGATTTCTCTTTCAGCTATGATCCAAATATATACACACAGCAGACTAGAGCATCAACAAGGCAAACACCAGCCGTGGAGACAGTAAAAATCCCCGAAAATGCTGGCAACCGACAAGATTCAGAAAAGAGGAAGGCAACACAGGGAATCAGTACTAGTACAGTACCATTTTACAAGCTATTCTCCTTTGCTGACTCATGGGATTATCTACTAATGCTAGTGGGCACAGTCACTGCTGTTGGAAATGGTATGTGCTTGCCTGCAGTAGCCCTACTCTTTGGTGAATTAATGGACGCATTCGGAAAAACTGTCAACACCAATAATATGCTGCATGAAGTTTCCAAGCTCTGTCTGAAGTTTGTGTATTTGTCCTCAGGAGCAGCTGTTGCCTCATTTTTCCAGGTGACTTGCTGGATGGTAACAGGAGAGAGACAGGCCACAAGAATAAGAAGTTTGTACTTGAAAACGATATTGAGGCAAGATATTGCCTTCTTTGATAAAGAAACCAAAACTGGAGAAGTCGTTGGGAGGATGTCAGGTGACACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTTGGGATGGTTATTCAGCTGGCAGCTACATTTATAGGAGGCTTCTTTGTAGCTTTTTTCAAGGGGTGGATTCTTGTCCTTGTCCTGTTATCTTGTATTCCACCTCTTGTTGCATCTAGTGCTGTCATGACCATTCTTTTAGCGAAGCTGGCCTCCCAGGAACAAACTTCTTATTCAGTAGCAGCAAGTGTAGTAGAGCAGACTATTGGATCAATAAGAACTGTTATCTCCTTTACAGGGGAGAAGCAAGCTATAGCTAAATACAAGAAGTCTCTAACCAAAGCTTATGATTCTGCAGTGAGGGAGGGCTTGGCTACTGGGTTAGGTCTTGGTTCTGTTATGTTTATTGTATTTTGCATTTTCGCTTTAGCTGTATGGTTTGGCGCGAAGCTGATAATCAACAAAGGATACTCAGGAGGGAATGTCGTTGGGGTGATTGTTGCTGTGTTGACTGCTTCCATGTCTCTAGGGCAGACATCTCCATGCATTAAAGCATTTGCAGCAGGACAAGCTGCAGCATTTAAGATGTTTGAGACAATCAATAGGAAGCCAGAGATAGATGCTTATGACACCAAGGGACTGAAATTGGATGATATTAGTGGAGATGTCGAATTAAGGGATGTTTATTTCAGTTATCCAGCAAGACCAGATGAACAAATTTTCAGTGGATTCTCTATCTCAATACCTAGTGGTACAACAACAGCTTTGGTTGGTCAGAGTGGAAGTGGGAAATCAACAGTCATCAGTTTAGTAGAGAGATTCTATGATCCTCAAGCTGGTGAAGTTCTTATAGATGGGATTAATCTCAAGGATTTTCAACTGAGATGGATCAGGCAGAAAATAGGCCTTGTCAACCAGGAACCTGTATTGTTTGCTTCTAGCATTAAAGATAATATTGCCTATGGGAAGGATGATGCCACCATTGAAGAAATTAGAGCTGCTGCTGAGCTCGCCAATGCTGCTAAATTTATTCATAAACTGCCTCAGGGCTTAGACACAATGGTTGGCGAGCATGGAATGCATCTATCTGGAGGCCAAAAGCAGCGCGTTGCTATAGCCAGAGCAATCCTGAAAGACCCGAGAATTCTCCTGCTGGATGAAGCTACAAGTGCTCTTGATTTGGGATCTGAGAGGATTGTGCAAGAGGCATTGGACAGGGTCATGATGAACAGAACTACTATCATTGTTGCACATCGCTTGAGTACAGTGAGGAATGCAGATATGATTGCAGTCATTCATCAAGGAAAGATTGTTGAAAAAGGTTCACACACTGAGCTACTCAGGGATCCTCATGGGGCATATCACCAGCTTGTACAGTTGCAAGAAATTAGCAGTGAGTCAGAACAACATGATGAAAAAGGTCTAGTTTGGCGCTTGGCCTGTCTTAACAAGCCAGAAATCCCAGTCTTACTGCTAGGTATTGTAGCTGCAATTGCCAACGGCTTAATATTACCCGCGTTTGCAGTACTATTTTCCACTATAATCGACAATTTCTATGAGTCAGCAGATAAACTCCGGAAGGAGTCTAAGTTTTGGGCGTTAATGTTTTTCATTCTTGGTGTGGCATCCTTGTTGATAACCCCGACAAGGACCTACCTCTTTGCTGTTGCTGGGTGTAAGTTAATTAAAAGGATCCGATCCATGTGCTTTGAGAAAGTTGTTCACATGGAGGTAGGCTGGTTCGACAAAGCCGAGAACTCGAGCGGTGCCATTGGAGGGAGGCTGTCTGCAGATGCAGCTTCAGTACGAAGTCTGGTTGGAGATGCGCTTGCTTTGGTGGTTCAGAACATTGCAACAGTAATTGCTGGCTTGGCTGCTGCTTTTGAAGCAAACTGGCTGTTGGCTCTCATTATCCTTGTTTTCCTACCTCTAATAGGAATCAATGGATGTATTCAGCTGCAATTCACAAAGGGTTTCAGCGGAGATGCCAAGAAAAGGTATGAGGAAGCAAGTCAAGTAGCCAACGAGGCAGTTGGGAATATTAGAACAGTAGCTTCTTTCTGTGCTGAAGAGAAGGTGATGCAGCTGTACCAGAAGAAATGTGAAGGCCCAGCAAAGACAGGGATGACACGAGGCTTGATCAGTGGGTTAGGCTTTGGGCTATCATTCTTCTTTGTTTATTTTATCTATGCAGTCACTTTTTATGCTGGAGCCCGTCTTTTTCGAGACGGGAAGACAACATTCTCAAAGATCTTAAGAGTGTTCTTTGCTCTCAGTATGGTGGGCCTAGGCGTCTCTCAGTCTGGCTCTTATGCCCCTGATGCCAGTAAAGCTAAAAGTTGTGCTGCTTCAATATTTGCAATTCTTGACCAGATATCAGAAATAGACTCTAGTGGCAGGTCAGGAAAGAGACTAAAAAATGTAAAGGGAGACATCAAGTTTCGGCATGTCAGTTTCAGGTATCCCACTAGGCCTGAAATCCAAATTTTCCGGGATCTTTGCCTGACTATTCGCTCTGGCAAGACAGTTGCCCTGGTTGGAGAAAGTGGGTGTGGAAAATCCACTGTGATCTCATTACTGCAGAGATTTTATGATCCTGATTCAGGTCGTATAACACTGGATGGGGCCGACATCCAAAAGCTGCAGCTGAGATGGCTGAGGCAGCAGATGGGTCTGGTGAGCCAGGAACCAACGTTATTCAATGACACCATCCGAGCCAATATTGGATATGGAAAAGAAGGAAATGCAACAGAGGCAGAAATCATAGCTGCAGCAGAATTAGCCAATGCCCACCACTTCATTAGTAGTTTACAGCAGGGGTATGATACAGCAGTAGGTGAACGTGGGGTGCAATTGTCTGGAGGACAGAAGCAAAGAGTGGCCATTGCCAGGGCTGTGGTAAAGGGCCCAAAGATACTGCTACTAGATGAAGCCACCAGTGCCCTTGACGCTGAATCTGAACGGGGAGCTGATTTGATTGCAGTGGTCAAGAATGGGTTGATTGCAGAAAAAGGAAATCATGAAAGTTTGATGAATATTAAGAATGGTCGTTATGCCTCCTTGGTTGCACTACATGCCACTGCTTCATCTCAGTGA 6681 43.87 MFVGAVAAAANGVSTPLMTILFGDVINSFGKDSNSKDMVHEVSKVSLKFVYLAIGTGVASFLQVTCWMLTGERQAARIRSLYLKTILRQDVGFFDKFTNAGEVVGRMSGDTVFIQDAMGEKVGKFIQLMATFLGGFIVAFCKGWLLTLVMLSCFPPLVIVGAFTTMFITKMASRGQAAYSVAAVVVEQTIGSIRTVASFTGEKQAIAKYNQSLSKAYTSGVQESVLSGLGFGLFMFVLFASYALAMWFGSKMIIDKGYTGGAVMNIIFSVVAGSMSLGQASPCLSAFGSGQAAAFKMFETIERKPEIDAYSSDGQKLDDIQGDVELRDVYFSYPTRPDEQVFKGFSLSIPSGTTAALVGESGSGKSTVISLIERFYDPQAGEVLIDATIEEIRAAAELANASKFIDKLPQGLDTLVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMINRTTIIVAHRLSTVRNADMIAVIHRGKIVEKGAHSELIKDPDGAYSLLIRLQEISSEQNASHDQEKPEISHPPKVPLAAVVNGADARFWALMIRAMCFEKVVYMEVNALSLLVQNSAAMIAGLVIAFVANWKMSFIILVLLPLFGANGYVQVKFLKGFTADAKKKYEEASQVANDAVGSIRTVASFCAEEKVMQLYQQKCEGPMNAGIREGLVGGVGYGVSFFLLFAVYATAFYAGARLVDVGQATFAEVFQVFFVLTLAAVGVSQSSSLAPDTGKAKNAAASIFAILDRESKIDSSDESGTTLENVKGEIEFHHVSFRYPTRPDIQIFRDLCLAIHSGKTVALVGESGSGKSTAISLLQRFYDPDSGHITLDGVEIQKLQLKWFRQQMGNATEAEISAAAELANAHKFISGLQQGYDTTVGERGIQLSGGQKQRVAIARAIVKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTLVVAHRLSTIKGADLIAVVKNGAIAEKGKHETLINIKDGIYASLVALHMSASSYACSFPLNQSFNLLSFLTDSTTDFSFSYDPNIYTQQTRASTRQTPAVETVKIPENAGNRQDSEKRKATQGISTSTVPFYKLFSFADSWDYLLMLVGTVTAVGNGMCLPAVALLFGELMDAFGKTVNTNNMLHEVSKLCLKFVYLSSGAAVASFFQVTCWMVTGERQATRIRSLYLKTILRQDIAFFDKETKTGEVVGRMSGDTVLIQDAMGEKVGMVIQLAATFIGGFFVAFFKGWILVLVLLSCIPPLVASSAVMTILLAKLASQEQTSYSVAASVVEQTIGSIRTVISFTGEKQAIAKYKKSLTKAYDSAVREGLATGLGLGSVMFIVFCIFALAVWFGAKLIINKGYSGGNVVGVIVAVLTASMSLGQTSPCIKAFAAGQAAAFKMFETINRKPEIDAYDTKGLKLDDISGDVELRDVYFSYPARPDEQIFSGFSISIPSGTTTALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINLKDFQLRWIRQKIGLVNQEPVLFASSIKDNIAYGKDDATIEEIRAAAELANAAKFIHKLPQGLDTMVGEHGMHLSGGQKQRVAIARAILKDPRILLLDEATSALDLGSERIVQEALDRVMMNRTTIIVAHRLSTVRNADMIAVIHQGKIVEKGSHTELLRDPHGAYHQLVQLQEISSESEQHDEKGLVWRLACLNKPEIPVLLLGIVAAIANGLILPAFAVLFSTIIDNFYESADKLRKESKFWALMFFILGVASLLITPTRTYLFAVAGCKLIKRIRSMCFEKVVHMEVGWFDKAENSSGAIGGRLSADAASVRSLVGDALALVVQNIATVIAGLAAAFEANWLLALIILVFLPLIGINGCIQLQFTKGFSGDAKKRYEEASQVANEAVGNIRTVASFCAEEKVMQLYQKKCEGPAKTGMTRGLISGLGFGLSFFFVYFIYAVTFYAGARLFRDGKTTFSKILRVFFALSMVGLGVSQSGSYAPDASKAKSCAASIFAILDQISEIDSSGRSGKRLKNVKGDIKFRHVSFRYPTRPEIQIFRDLCLTIRSGKTVALVGESGCGKSTVISLLQRFYDPDSGRITLDGADIQKLQLRWLRQQMGLVSQEPTLFNDTIRANIGYGKEGNATEAEIIAAAELANAHHFISSLQQGYDTAVGERGVQLSGGQKQRVAIARAVVKGPKILLLDEATSALDAESERGADLIAVVKNGLIAEKGNHESLMNIKNGRYASLVALHATASSQ* 2227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2719816 2732762 + Vvi5g267 Vvi5g267 786409

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g267 2226 Gene3D ABC transporter type 1, transmembrane domain 547 769 IPR036640 GO:0005524|GO:0016021
Vvi5g267 2226 Gene3D ABC transporter type 1, transmembrane domain 1082 1977 IPR036640 GO:0005524|GO:0016021
Vvi5g267 2226 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1668 2183 - -
Vvi5g267 2226 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1035 1662 - -
Vvi5g267 2226 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 387 536 - -
Vvi5g267 2226 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 2183 2222 - -
Vvi5g267 2226 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 386 - -
Vvi5g267 2226 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 563 1009 - -
Vvi5g267 2226 CDD ABC_MTABC3_MDL1_MDL2 1418 1656 - -
Vvi5g267 2226 Pfam ABC transporter transmembrane region 1 274 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 Pfam ABC transporter transmembrane region 578 730 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 Pfam ABC transporter transmembrane region 1685 1953 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 Pfam ABC transporter transmembrane region 1095 1367 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 Gene3D - 862 1003 IPR027417 -
Vvi5g267 2226 SUPERFAMILY ABC transporter transmembrane region 1 306 IPR036640 GO:0005524|GO:0016021
Vvi5g267 2226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1409 1656 IPR027417 -
Vvi5g267 2226 CDD ABC_6TM_Pgp_ABCB1_D2_like 1677 1990 - -
Vvi5g267 2226 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 781 995 IPR003439 GO:0005524
Vvi5g267 2226 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2007 2218 IPR003439 GO:0005524
Vvi5g267 2226 CDD ABC_6TM_Pgp_ABCB1_D2_like 559 764 - -
Vvi5g267 2226 ProSitePatterns ABC transporters family signature. 898 912 IPR017871 GO:0005524
Vvi5g267 2226 ProSitePatterns ABC transporters family signature. 2147 2161 IPR017871 GO:0005524
Vvi5g267 2226 ProSitePatterns ABC transporters family signature. 423 437 IPR017871 GO:0005524
Vvi5g267 2226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 522 IPR027417 -
Vvi5g267 2226 Pfam ABC transporter 1438 1585 IPR003439 GO:0005524
Vvi5g267 2226 Pfam ABC transporter 343 388 IPR003439 GO:0005524
Vvi5g267 2226 Pfam ABC transporter 801 926 IPR003439 GO:0005524
Vvi5g267 2226 Pfam ABC transporter 401 451 IPR003439 GO:0005524
Vvi5g267 2226 Pfam ABC transporter 2027 2175 IPR003439 GO:0005524
Vvi5g267 2226 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 289 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 ProSitePatterns ABC transporters family signature. 1557 1571 IPR017871 GO:0005524
Vvi5g267 2226 SUPERFAMILY ABC transporter transmembrane region 1082 1402 IPR036640 GO:0005524|GO:0016021
Vvi5g267 2226 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1418 1654 IPR003439 GO:0005524
Vvi5g267 2226 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1686 1972 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 Gene3D - 773 861 IPR027417 -
Vvi5g267 2226 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1096 1383 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 771 996 IPR027417 -
Vvi5g267 2226 SMART AAA_5 808 958 IPR003593 -
Vvi5g267 2226 SMART AAA_5 351 497 IPR003593 -
Vvi5g267 2226 SMART AAA_5 1445 1631 IPR003593 -
Vvi5g267 2226 SMART AAA_5 2034 2212 IPR003593 -
Vvi5g267 2226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1999 2218 IPR027417 -
Vvi5g267 2226 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 324 520 IPR003439 GO:0005524
Vvi5g267 2226 CDD ABC_6TM_Pgp_ABCB1_D1_like 1095 1378 - -
Vvi5g267 2226 Gene3D - 1997 2226 IPR027417 -
Vvi5g267 2226 CDD ABC_6TM_Pgp_ABCB1_D1_like 14 297 - -
Vvi5g267 2226 Gene3D ABC transporter type 1, transmembrane domain 3 357 IPR036640 GO:0005524|GO:0016021
Vvi5g267 2226 CDD ABC_MTABC3_MDL1_MDL2 781 994 - -
Vvi5g267 2226 PANTHER - 563 1009 - -
Vvi5g267 2226 PANTHER - 1668 2183 - -
Vvi5g267 2226 PANTHER - 2183 2222 - -
Vvi5g267 2226 PANTHER - 1 386 - -
Vvi5g267 2226 PANTHER - 1035 1662 - -
Vvi5g267 2226 PANTHER - 387 536 - -
Vvi5g267 2226 Gene3D - 386 542 IPR027417 -
Vvi5g267 2226 Gene3D - 1408 1657 IPR027417 -
Vvi5g267 2226 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 577 746 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vvi5g267 2226 SUPERFAMILY ABC transporter transmembrane region 577 761 IPR036640 GO:0005524|GO:0016021
Vvi5g267 2226 SUPERFAMILY ABC transporter transmembrane region 1673 1986 IPR036640 GO:0005524|GO:0016021
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g267 K05658 ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] - vvi:100266576 2213.34
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g267 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0017245 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6