Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g286 ATGGTGGGTCTTTCTCTTATTGCCGGAGCTGCTTCCACTGGAGCAGTATGCCTGGATGGAACATTACCTGGTTACCACCTCCACCGGGGATATGGGTCAGGGGCAAATAGTTGGCTCATTCATTTGGAGGGTGGAGGATGGTGCAATACAATTAGAACTTGTGTTTTCCGGAAAAAAACTCCTCATGGTTCATCAACACATATGGAAAAGCTGATACCATTTACAGGAATATTGAGTAACAGAGCTGAAGAAAATCCCGATTTTTATAACTGGAATAGAGTCAAGCTTCGATACTGTGATGGTGCTTCTTTCAGTGGAGACAGTCAAAATGAGGCCAAGACATTGTATTTCCGGGGACAACGCATCTGGTTAGCTGCTATGAAAGATCTGATGTCAAAGGGAATGCACTATGCTAATCAGGCTCTTCTTTCTGGATGCTCAGCTGGGGGCTTAGCAGCTATACTGCACTGTGATGAGTTCAGGGAATTATTTCCAAGAACTACTAGAGTCAAGTGTCTCAGTGATGCAGGGTTATTTCTTGATGTGATTGATGTATCTGGTGGGCGTACTTTAAGGCATATGTTTGGAGGCGTGGTCAGATTACAGCAAGTGGGGAAAATGCTGCCACAGGCTTGTACCAGCCACCTCAATCCAACCTTGTGCTTTTTCCCTCAGAACTTAATTCCCCTGACTAAGACCCCGCTTTTTCTTCTCAATGCAGCTTATGATTCATGGCAGATCCTGGCCAGTTTAGCTCCGCACTCAGCTGATCCCCGTGGCTACTGGCAGAAGTGCAGATTAAATTATGCATATTGCTCTTCATCACAAATTCAAGTTCTCCAAGATTTCAGAAAACAAATGCTAAATGCTGTAAGTGGCTTCTCAGGGTCCAAAAGAAATGGGCTATTCATAAACTCATGTTTTGCTCATTGTCAGACAGAGAGACAGGACACTTGGTTTGCTCATAATTCTCCTCGTATCGGAAACAAGGGCATCGCCCAATCTGTGGGGGACTGGTATTTTGATCGAGCTGAAGTCAAGAGTATTGATTGTCCTTATCCTTGTGACAAGACCTGCCACAATCTGGTCTTCCGCCAAAGTTTTTAG 1107 44.63 MVGLSLIAGAASTGAVCLDGTLPGYHLHRGYGSGANSWLIHLEGGGWCNTIRTCVFRKKTPHGSSTHMEKLIPFTGILSNRAEENPDFYNWNRVKLRYCDGASFSGDSQNEAKTLYFRGQRIWLAAMKDLMSKGMHYANQALLSGCSAGGLAAILHCDEFRELFPRTTRVKCLSDAGLFLDVIDVSGGRTLRHMFGGVVRLQQVGKMLPQACTSHLNPTLCFFPQNLIPLTKTPLFLLNAAYDSWQILASLAPHSADPRGYWQKCRLNYAYCSSSQIQVLQDFRKQMLNAVSGFSGSKRNGLFINSCFAHCQTERQDTWFAHNSPRIGNKGIAQSVGDWYFDRAEVKSIDCPYPCDKTCHNLVFRQSF* 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2869463 2876265 + Vvi5g286 Vvi5g286 786428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g286 368 Pfam Pectinacetylesterase 2 345 IPR004963 GO:0016787
Vvi5g286 368 PANTHER PECTIN ACETYLESTERASE 2 1 365 - -
Vvi5g286 368 PANTHER NOTUM-RELATED 1 365 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g286 Vvi14g17 ECH
Vvi5g286 Vvi7g482 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g286 K19882 - vvi:100251007 777.704