Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g290 ATGGCGACAAATGGAACAGCCAAGGTTTGCCCGGCGCCAATGAAGGCAACGTCCAATGGATCCTTCCAAGGTGACAATCCCCTGGATTTTGCGCTTCCCCTCCTCATCTTGCAGATATGCCTGGTCGTCGTCTTCACCAGAACGCTTGCCTTGATTCTGAAACCTCTCAGACAGCCCAGAGTCATTGCAGAGATTATCGGAGGAATACTGCTCGGCCCATCTGCGTTGGGGCGAAGTACCAAGTTTCTGCACAGAGTCTTCCCTGCCAGAAGCATGACTGTCCTGGACACTGTGGCCAACATTGGCCTCCTCTTCTTCCTGTTTTTGGTGGGTCTTGAGCTTGACATTCGAGCTATCCGAAGGACCGGCAAACAGTCCCTAGGAATAGCCGTCGTAGGTATCACCTTCCCTTTCGTTCTTGGCATTGGCACTTCAGTTGTTCTACGCTCCACAATTTCCAAGGGAGTAGACCACGCCCCTTTCCTCGTCTTCATGGGCGTCTCCTTGTCCATCACCGCTTTTCCAGTCCTTGCCCGTATCCTAGCAGAGCTGAAACTTCTCACCACTGACGTGGGCCGCATGGCAATGTCAGCGGCCGCCGTCAATGACGTTGCTGCCTGGATTCTCCTCGCACTCGCCATAGCTCTCTCTGGCGATAACACATCACCCCTCGTTTCCGTATGGGTCCTACTCTGTGGCTGTGCGTTTGTGGCAGCAGCTATCCTATTCTTAAGACCGGCACTTGCATTTATGGCTCGGCGCTCCCTTGGAGGCGAACCCGTGAACGAGCTCTACATATGTATTACGCTATCGCTAGTATTGGCTGCAGGTTTCGTCACCGACACAATCGGCATACATGCGCTCTTTGGGGCGTTTGTCGTGGGCATAGTTGTACCCAAAGATGGCCCCTTTGGGGAGATCTTAATAGAGAAGATCGAGGATCTGGTTTCAGGGCTTTTTCTGCCGCTCTACTTTGTATCAAGTGGACTCAAGACCAATGTCGCTACCATAAGCGGTGGCCAATCCTGGGGCCTGCTAGTCCTGGTTATATTCAACGCTTGTTTTGGAAAGATTCTGGGGACGGTTGTGGTCTCCCGCATATTTAAGGTGCCGATGAGGGAGGCTGTTGTACTTGGATTCCTCATGAACACCAAGGGCTTGGTGGAGCTGATCGTCCTCAACATTGGCAAGGACCGGAAGGTGCTGAATGATCAGACTTTTGCTATCTTAGTTCTTATGGCGTTGTTCACCACCTTCATCACCACCCCAATTGTGACCGCCTTGTATAAGCCAGCCAGGAAGATAGCATCTTACACGCACCGGACTGTTCAGCGCAGAGGACCTGATTCAGAGTTCCGTATACTGGCATGCTTCCATAGCACTCGAAACATTCCCACAATGATCAACCTAATAGAGTCTTCCCGTGGGACACGACGCGGGCGTCTTTGTGTGTATGCTATGCACTTGATGGAGCTCTCAGAGCGGTCTTCCGCCATCTCAATGATGGTGATAGCATTTGAGGCCTACCAGCAGCTCAGCAGTGTTTCTGTCCGTCCTATGACGGCCATCTCCCCGCTCAACAGTATCCACGAAGACATCTGCACAAGCGCCCACCAAAAGCAAGTGGCCATGATTCTACTCCCATTTCACAAGTATCAGCGTCTGGATGGGGTGATGGAGTCGTTGGGACACTCGTTCCATCTGGTGAACCAGCGGGTCATTCGGCACGCCCCTTGCTCTGTAGGAATCCTTGTAGACCGCGGCCTAGGAGGTACCAGTCAAGTCTCCGCCAGTCACGTGTCTTATTCCATAGCCATTCCTTTTTTTGGTGGACGTGACGACCGTGAAGCTCTGGCATATGGTGTTAGGATGGCCGAGCACCCTGGAATCAAGCTCACAGTCATAAATTTTGTTGCTCCCCCAGGGAAGTCGCTTCTGGATTGGAATTCCGGAGATGACAATGACCAACTCTTCTCCGAGCCCAATTTCACGGAAAATGAGTCCATATCCTACGAGAAGCGGGTGGTAGAAGAGAAGGCAGGCATTGTGGCAAAGCTGACATCAATGACCAACACCAACCTCTTCTTGGTGGGGAGAATGTCGGCAGTAGCAGGACTGACAGAAAGAAGCGACTGTCCAGAACTGGGCCCAGTTGGGAGCTTCCTAGCGTCTTCCGAATTCTCCACCACCGCATCGGTTTTAGTTATTCAGCAGTATAACCCCACAGCAAATTTTTCCGCGCTGGCGGAAGAAGAAGCTTCAGAACTCTCAGACGGGCCAGATGATGCACCAGTGACTCGGCAGTCGGATCCCAATTAA 2319 52.22 MATNGTAKVCPAPMKATSNGSFQGDNPLDFALPLLILQICLVVVFTRTLALILKPLRQPRVIAEIIGGILLGPSALGRSTKFLHRVFPARSMTVLDTVANIGLLFFLFLVGLELDIRAIRRTGKQSLGIAVVGITFPFVLGIGTSVVLRSTISKGVDHAPFLVFMGVSLSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGDNTSPLVSVWVLLCGCAFVAAAILFLRPALAFMARRSLGGEPVNELYICITLSLVLAAGFVTDTIGIHALFGAFVVGIVVPKDGPFGEILIEKIEDLVSGLFLPLYFVSSGLKTNVATISGGQSWGLLVLVIFNACFGKILGTVVVSRIFKVPMREAVVLGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMALFTTFITTPIVTALYKPARKIASYTHRTVQRRGPDSEFRILACFHSTRNIPTMINLIESSRGTRRGRLCVYAMHLMELSERSSAISMMVIAFEAYQQLSSVSVRPMTAISPLNSIHEDICTSAHQKQVAMILLPFHKYQRLDGVMESLGHSFHLVNQRVIRHAPCSVGILVDRGLGGTSQVSASHVSYSIAIPFFGGRDDREALAYGVRMAEHPGIKLTVINFVAPPGKSLLDWNSGDDNDQLFSEPNFTENESISYEKRVVEEKAGIVAKLTSMTNTNLFLVGRMSAVAGLTERSDCPELGPVGSFLASSEFSTTASVLVIQQYNPTANFSALAEEEASELSDGPDDAPVTRQSDPN* 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2902756 2906309 + Vvi5g290 Vvi5g290 786432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g290 772 Pfam Sodium/hydrogen exchanger family 41 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi5g290 772 Gene3D - 484 702 - -
Vvi5g290 772 MobiDBLite consensus disorder prediction 748 772 - -
Vvi5g290 772 PANTHER CATION/H(+) ANTIPORTER 19 5 502 - -
Vvi5g290 772 PANTHER CATION/H(+) ANTIPORTER 19 501 747 - -
Vvi5g290 772 PANTHER CATION/H + ANTIPORTER 501 747 - -
Vvi5g290 772 PANTHER CATION/H + ANTIPORTER 5 502 - -
Vvi5g290 772 Gene3D - 34 437 IPR038770 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g290 - - vvi:100266624 1429.46