Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g367 ATGGGGTTTGAATTAGGCTCTGTTGTGATGAAATTGGGAATGGTCTCTACATCTGATCACAGTTCTGTGGTCTCCATGAATCTATTTGTGGCGCTTCTCTGCGCGTGTATAGTGGTGGGTCACTTGTTAGAGGAGTATCGATGGATGAACGAGTCAATCACAGCCCTTGCGCTTGGTCTGTGCACAGGAATTATTATTCTACTAACCACCCGAGGAAAAAGCTCACATATTTTAGTATTCAGTGAAGATCTTTTCTTTATTTATCTTCTTCCACCTATCATTTTTAATGCTGGCTTCCAGGTGAAAAAGAAGCAGTTTTTTCGTAACTTCATGACCATCATGCTGTTTGGAGCTATTGGAACTCTGATATCTTTTGGCATCATATCATTAGGTGCTATACACTTTTTCAAGAAGATGAAAATTGGCTCCCTCGATATAGGGGATTACCTTGCACTTGGAGCAATATTTTCTGCAACAGATTCCGTTTGCACATTGCAGGTGCTTAATCAGGATGAGACACCCTTACTCTACAGTCTGGTTTTTGGAGAAGGTGTTGTGAATGATGCCACATCTGTGGTGCTTTTCAATGCAATCCAGAGCTTTGACCTCTCTCACATCGATTCAAGCATTGCCTTGCAGTTCATTGGCAACTTTTTGTATTTATTTATCACAAGTACCATGCTGGGAGTTTTTGCTGGACTGCTTAGCGCATATATTATTAAAAAGCTCTATTTTGGAAGGCATTCGACTGATCGGGAGGTTGCAATCATGATACTCATGGCTTACCTTTCGTATATGCTGGCTGAACTGTTCTATTTAAGTGCCATTCTCACTGTGTTCTTTTGCGGGATTGTCATGTCTCACTACACATGGCATAATGTGACTGAAAGTTCAAGAGTGACTACCAAGCATGCTTTTGCGACATTGTCATTTGTTGCTGAAATTTTTATCTTTCTATATGTTGGCATGGATGCCTTGGACATTGAGAAATGGAGATTTGTAAGTGATAGCCCTGGAAAATCAATTGGTGTGAGCTCGATACTGTTGGGACTGGTTCTGGTTGGAAGGGCAGCATTTGTTTTCCCTTTATCCTTTCTGTCCAACTTGACTAAGAAATCATCAAGCGAGAAAATTCACATAAAACAGCAAGTCACAATTTGGTGGGCTGGTCTTATGCGTGGTGCTGTTTCTATGGCACTAGCTTATAATCAGTTTACTAGGGCAGGCCATACTCAATTGCGCGGGAATGCAATTATGATCACCAGTACTATCTCAGTTGTTCTTTTCAGTACAGTGGTGTTTGGGTTGATGACAAAGCCTTTAGTGAGGTTATTGCTTCCTTCTCCAAAACCCTTCACCAGCATGATTTCTTCTGAACCATCCAGTCCTAAATACCTCGTTGTCCCACTTATCGGTAATGGGGAGGAGACAGAAACTGACCAGGCCAGCCAAAATGTACCCCGCCCCACCAGCTTACGGATGCTCCTAAGCACTCCCAGTCACACTGTTCACCATTACTGGCGAAAATTTGATGATTCCTTCATGAGACCTGTTTTTGGTGGACGGGGATTTACACCCTTCATCCCTGGATCACCCACTGAACCAAACCTTGGTCAATGGCGATGA 1626 42.62 MGFELGSVVMKLGMVSTSDHSSVVSMNLFVALLCACIVVGHLLEEYRWMNESITALALGLCTGIIILLTTRGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAIGTLISFGIISLGAIHFFKKMKIGSLDIGDYLALGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLSHIDSSIALQFIGNFLYLFITSTMLGVFAGLLSAYIIKKLYFGRHSTDREVAIMILMAYLSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGKSIGVSSILLGLVLVGRAAFVFPLSFLSNLTKKSSSEKIHIKQQVTIWWAGLMRGAVSMALAYNQFTRAGHTQLRGNAIMITSTISVVLFSTVVFGLMTKPLVRLLLPSPKPFTSMISSEPSSPKYLVVPLIGNGEETETDQASQNVPRPTSLRMLLSTPSHTVHHYWRKFDDSFMRPVFGGRGFTPFIPGSPTEPNLGQWR* 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3676949 3684048 + Vvi5g367 Vvi5g367 786509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g367 541 Pfam Sodium/hydrogen exchanger family 31 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi5g367 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi5g367 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi5g367 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi5g367 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vvi5g367 541 PANTHER SODIUM/HYDROGEN EXCHANGER 3 8 540 - -
Vvi5g367 541 Gene3D - 146 197 - -
Vvi5g367 541 PANTHER SODIUM/HYDROGEN EXCHANGER 8 540 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g367 Vvi14g227 ECH
Vvi5g367 Vvi7g214 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g367 - - vvi:100232960 1013.45