Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g371 ATGGCGTCTCAACAAAATGTTGAGTTGGAGGCAGCAAAGTTTTTACACAAGCTCATTCAAGATTCTACTGATGAGCCTGCAAAACTGGCGACAAAACTCTATGTGATATTGCAACACATGAAATCAAGCGGGAAGGAGCATTCGATGCCATACCAAGTAATATCAAGGGCCATGGAGACTGTTATCAATCAACATGGTCTTGATATTGAGGCTTTAAAGTCATCACGCCTTCCTTCGAGTGGTGGAACTCATGTAGGAGATTCTTCAGCGGCAAGATTAGCAGGATCATCGTCGGCGGCTGGGGTTGCAAAAGATACCCAAGCAGGCTTGGCTGAAAACGAAATGGCTAAAATTGATGCGTTTGCTTCCAGCAGGCCACCTGTTGGCCCAAGCAGTGCAGGCCATGATATATATCAAGGATCTGTATCCCATAAGAGTGGTGGGAAGTCCTTTGATCATGAGAGTCCATCTAGTTTGGACACTAGATCTGCCAACTCGCAGTCACAAGAAAGGCGTGATTCAGCAAATTGGGAAAAGCAGGTGAATCAAAAGGATAGTAAAAAATCCAATGCTAAGAGAAAGAGAACAGATCCGTCACCAGCTATGGAGCCACATGTTGACAACCCGAACCATCCTGACACTCGCAACAGTGTAGTTAATCCAAGGAAGGGGAAGCTGATGAACAAGGTGGAATCACCTGGGAGTTTTTCTGTTAAAAGTGGTGCTGCTGCAAAGATTCATGGAGGGATGCCTAGTTCATATCCAGTGGTAGAACCAGGATTCTCAAGTTCAATGCAGTTCAGTGGTTCTTCCTATGATAATCATGCTTTGGTTGCAAAGATGCATAAAGAAAGAAACATGGAGGCTTTTTCTGCTATGAATTCTTCTTTGCTTGAGGCCTCATCTGGTAAAAATGCTGTTGATGCTGAACAGTGGAAGCATGGATTAATGAGAAGTGCAGTAATAGGTGCCCCTGAGAAAACTATAGAAGCTCAGATGTTATCAGGTAATCATGGGGAAGAAGAATCCAAAACACTCTCCATTGGAAAGGTCTTGGATCATGAGGGAGGAACTTCAAATACATCAGGAAATGCAAATAAAATGGCTCAGGGCGGGGGGGCAAACATGGTTACAGAAATGAGCATGCTTAGAAGTGCAACTTTTAGAGATGCTGGAAAATCTCCAATTCCCCAGGCTCTTCCTTTCTCTGGTATGCCTTTCAAGGAACAACATTTGAAACAGCTAAGAGCACAATGCCTTGTCTTTTTAGCAATCAGAAATAATTTGATGCCGAAGAAGTTGCATCTTGAAATCGCACTTGGGAACATCTATCCCAAAGAAGGTGGCATTACAGATGGGCCTCGCAAAGAGCTGATTGACCATAAAGGAAAAGATTATTCTCTGAATGAACCGAGTAATGTTCCTGAAGTCCCAGTGCCATTTGGAAGACTAAGTAATGTTAGGGATACTGAAAGAATTCCTCCAGGTTCCTCATCTAGTGGAAGTCTCCTTGAGACTGACTCCATGTCAAAAGCTGGTGAGAACACAAAAATAATGGAAGACAATCTTACTGGGATTGCAGAAGAAAGAAGACATATTTTAGCTATGAGAAGAAAACCAGAGGCTGACATGCATACTCAGGAGGTGGCAGAATCACAGGCATTTCCATCTACAGCATCTCAGCCTGATTCTTCAAGCATAATGGGTTTAACTGCTAGTCCTCATGAGGACAATTTGGAGAGTAGTCATCTGCAAGTTGGGAGGGCAAACCAAGCCTCTTCTCTAATGGGAATAAATAGGCAGATTCAACCTGAGCTAATTAACTGGACTGGAATTGGGAATCATAATGATGCTTCTAGGGGACAACTCCCAGTTTCTGCTATTCAGCATGAGCCTTTGCTGGAAAGAAAAGACAATACTCCAAGTCAGTCTCAAAGTTTTGGTGACACTAGTGTTCAAGGAAATCAACATTCTGAAAATCACTTGTCTCCATTCTTGCTGAGAGATCATTGGAAGCCTGTGTCAGGAATGGACAATGATCACCACAAAATATTTCAAACAAAGGAGGCTAATCTGTTGATCAAGCATGTTTCACGAGATGATTCCAAGGTTACTGAAATTCAAACAAGATGCATTTCAGATGGATGCAAAGCAGTTGCTATTGATGACACAACAAAAAATGGCTATCCTTATAAAATGGTGGAAAAATCTGCAGAACAAGGAGATGAAGACAGGCCAATGTTAGTTAATTTGCCACCTTCTCCAAAGTGCACCACGTCAGAGAAATGGATCATGGATCAGCAGAAAAGAAGACTACATGTTGAGCAAAATTGGTTACTAAAAGAGCAAAAAACTGAGAAAAAAATTGCTGCTTGTTTTGAGAAGTTGAAGGGTACTGTCAGTTCATCTGAAGATATTTCTGCAAAAACCAAAAGTGTTATTGAATTGAAAAAGCTTCAACTGTTAGCACTTCAGCGTCGTCTCAGGCGTGATTTTCTGAATGATTTTTTCAAACCAATAGCAATTGAATTGGATCGCTTGAAATCTTTTAAGAAACATAGACATGGTAGAAGGATAAAACAACTTGAAAAGTTTGAGCAGAAAATGAAGGAAGAGCGACAAAAGAGAATTCGGGAGAGACAGAAGGAGTTCTTCAGCGAAATAGAAGTTCATAAGGAAAGACTGGACGATGTGTTTAAATTTAAGAGAGAAAGGTGGAAGAGTTTCAGTAAATATGTAAAGGAATTTCACAAAAGAAAGGAGAGGATACATCGTGAGAAGATAGATAGAATCCAGCGTGAGAAGATTAATCTATTGAAGATCAATGATGTGGAGGGCTATCTGCGAATGGTTCAGGATGCAAAATCTGATCGCGTCAAGCAACTGCTCAAAGAGACTGAAAAATATCTTCAAAAGCTTGGATCCAAACTACAGGAGGCCAAGTCTATGACAAGACACTTTGAGGTTGATATGGATGAGAACCGAACTGCAAATGTTGTTGAGAAGAATGAAACTGCTGTTGACAATGAAGATGAAAGTGATCAGGCAAAGCATTATCTGGAAAGCAATGAAAAGTACTATCTAATGGCTCATAGTATAAAGGAGAGCATTGCTGAGCAGCCAACCTGCCTTCAGGGTGGAAAATTAAGGGAGTATCAAATGAATGGCCTACGGTGGTTGGTTTCGCTATACAATAATCATCTGAATGGGATTCTTGCTGATGAAATGGGCCTTGGTAAAACTGTTCAGGTTATTGCGCTAATTTGTTACCTAATGGAAACGAAAAATGACAGAGGACCTTTTCTGGTGGTGGTACCATCTTCAGTTCTATCTGGATGGGAGTCAGAAATCAACTTTTGGGCCCCTAGTGTAAACAAAATTGTCTATTCTGGGCCTCCGGAGGAGCGACGCAAGCTGTTCAAGGAAAGAATTGTTCATCAAAAATTTAATGTCCTCCTGACCACATATGAGTATTTGATGAACAAGCATGATAGGCCAAAATTAAGCAAAATACATTGGCATTATATTGTAATTGATGAAGGACATCGGATAAAGAATGCTTCTTGCAAGTTGAATGCTGATTTGAAGCATTATCAGAGCTCTCATAGATTGTTGTTAACTGGAACACCACTTCAGAACAATCTTGAGGAACTGTGGGCACTGCTTAACTTCTTGTTGCCAAATATCTTTAACTCATCAGAGGATTTTTCTCAATGGTTCAACAAACCGTTTGAAAGTAATGGTGACAATTCACCTGATGAAGCCTTGCTGTCCGAGGAGGAGAATCTTTTGATCATCAACCGCCTTCACCAAGTTCTTCGACCATTTGTACTTCGGAGGCTGAAACACAAGGTTGAAAATGAATTACCTGAAAAGATTGAAAGACTTGTAAGGTGCGAAGCTTCTGCATATCAGAAGCTTTTGATGAAGAGGGTAGAAGAAAACCTGGGCTCAATTGGAAGTACAAAGGCTCGGTCGGTGCACAACTCTGTTATGGAGCTACGTAATATATGCAATCACCCTTACCTTAGCCAGCTTCATGCAGATGAGGTTGACAATTTAATCCCTAAACATTTTCTGCCACCTGTTGTGAGACTTTGTGGGAAGCTTGAGATGTTAGATCGATTACTTCCCAAACTAAAAGCAACCGATCATCGGGTTCTTTTCTTTTCCACAATGACTAGGCTGCTTGACGTCATGGAGGAATATCTGCACTGGAAACAGTATCGATACCTTCGATTGGACGGACATACATCTGGGGGTGATCGTGGAGCCCTCATTGAGCAGTTCAACCAACCAGATTCTCCATATTTTATTTTTTTGCTCAGCATCCGTGCTGGAGGCGTTGGAGTGAATCTTCAGGCTGCTGATACAGTGATCATATTTGACACTGACTGGAATCCTCAGGTTGATCTGCAAGCTCAGGCAAGGGCCCATAGAATTGGCCAAAAGAGGGATGTTCTTGTCCTTCGATTAGAAACAGTCCAAACCGTGGAAGAACAAGTCAGGGCTTCAGCTGAACATAAACTGGGAGTTGCTAATCAGAGTATCACTGCTGGTTTCTTTGATAACAATACAAGTGCAGAAGATAGAAGGGAATACTTGGAGTCGTTGCTGCGGGAGTCTAAGAAAGAGGAAGCTATGCCTGTTTTAGATGATGATGCTCTGAATGATCTCTTAGCCCGCAGTGAGTCGGAGATTGATATATTTGAATCCATTGACAAAAAAAGACAGGAAGCAGAGATGGCAACATGGAAAAAGCTAGTTGGACAGGGAATGGAGCTTGCACCTCCCCTTCCTTCTCGCCTTGTAACAGATGATGACTTGAAAGTATTCTATCAAGCAATGAAAATATATGAAGAATCAAATGCTGGGGTAATATCTAATGTTGGTGTAAAACGGAAGGGTGAGTATCTTGGGGGCCTTGATACACAACAGTATGGAAGAGGCAAACGAGCAAGAGAGGTGCGTTCCTATGAAGAACAATGGACAGAGGAAGAATTTGAAAAATTGTGTCAGGTTGACTCCCCTGAATCTCCCAAACTGAAGGAAGAAATGGTAGAAACAAACTTGCCAATTGATTCCAGTGGGCCTGTGGTGGCCACTAGTAACACAGAATCACCTGCTCCTGCTCCTGCTCCTGCTGCTCCTGCTGCTCCTGCTGCTCCTGCTCCTGCTCCTGCTGCTCCTGCTCCTGCTCCTGCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTCCCCCTCCACCACCTCCGTCAGCTCCCTCTGTAGAGCCGCCACCACAGCAAAGCAAAGAGGTAACACCACCATCTAGACGGGGCCGTGGGAGGCCAAAAAGAGCTACTTTGGACATCTCTTCTGCAGTGGTTCATCCAGCACCTTCAGGAGCTGAGAAACTGGATACAGGGTCTCAGAAGGGAAATGTATCTAGCTTTCCAACGGCTTCTGGTCCTCATTCTTTCCCTGGTCCCACAGCTGTAAAAGGTACCAGTTCGAGCATGCACAATGTTGGTGTGGGAGTTCCTGCTATTCCTCCTCAATCACTTCCTCCTGTTCCTCCTGGCTCTCAATCTACTGTACCAGATTCTTCTGTACCTGTGCAAGTTAAGGGACAAGGTCGAAAGGCTCAAAGTGGAGGAGAGGGACCCAGGCGCAGGGGAAAGAAACAGGCTTCTGTACCACCTGCTGTTCCTGATGCTTTAGCTGGTCAGGATCCAAAATTAAATGAGCAATCACAAAATAAATTGGGTGATCCAAAATTGAATGAGCCATCACAAAATAAGTTGGGGGATCCAAAATTGAATGAGCAATCACATAATAACACAGGGGATTCTATTCTAACAGCTTCTAGCTTTCCAACAACTCCTGGCCCTGATTCTGTTCCTGCTTCTACTACTGTAAAAAGTATCAGTGGAACCGTGCAACACTTTGGTGTAGGAATTGCTCCTAGTTCTCAGGCAGCACCTCCTCTTCATCTTGTTGCCTCTGATTCTAAATCTACCCCCCCTTGCCCCCCTGTAGTGACCCAAGTTAAAGGACAAGGTCGCAAAACTCAAAGTGGAGCAGAAGCACCCCGACGTAGAGGAAGGAAACAGGCTTTGTTACCACCAGCAGTTCCTGGTGGCTTAGTTGGTGAGGAGCCAGCGAATCAGGGATCACAGAATAAATCTGGGGACTTAGTGGGAGCAAGTAGTGGAACAGTTTCTAGCTTGCCAGTGGCTCCTGGTCCTACTCCAGTTTCTGCTGTAAAAGTTATCAGTGGAACGATGCATCATTTTGGTGTGGGGATTGCTCCTAGTTCTCAGCCAGTTCCTCCTTCCCCTTCTGTTGCTCCCAGTTCTCAATCTACCCCTCCGTGTCCTACTGCTCCTGTGCGAGTGAAAGGGCAAAGTCAGAAGGCTCAGAGTGGAGCAGGAGCTCCTCGGCGAAGGGGAAAGAAACAGTGTCCAATACCTCCTGGTGCTCCTGATAGTTTAGCTGGGCAGGTTCCAAAATCAAGTGAGAAGGCACAGAGCAAATCGGGGGATTTGTTGGGGAGTAAAGCAATTGCTGTGGGAAGTGAGCAAGAGAAGGATTCTCGGGAACTAGCAAATGCTATCCAGCAGAAAGCATGTAAAATCCCTACTTCTAATGTTTTAGCTGGTGTGGATCTGAAATCAACTAAGCAACCAGACTATTCTGCCCAAAACAAGAACCAAGAATCTTGCCCACAACAGATAGTGTTGCTGGTGAAGATCCAATATCAAATGAGAAGGCACAGGATAAGTCTGGAGATTCATTGGGTAATCAAGCTATTGCCATGA 6801 43.64 MASQQNVELEAAKFLHKLIQDSTDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMAKIDAFASSRPPVGPSSAGHDIYQGSVSHKSGGKSFDHESPSSLDTRSANSQSQERRDSANWEKQVNQKDSKKSNAKRKRTDPSPAMEPHVDNPNHPDTRNSVVNPRKGKLMNKVESPGSFSVKSGAAAKIHGGMPSSYPVVEPGFSSSMQFSGSSYDNHALVAKMHKERNMEAFSAMNSSLLEASSGKNAVDAEQWKHGLMRSAVIGAPEKTIEAQMLSGNHGEEESKTLSIGKVLDHEGGTSNTSGNANKMAQGGGANMVTEMSMLRSATFRDAGKSPIPQALPFSGMPFKEQHLKQLRAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHKGKDYSLNEPSNVPEVPVPFGRLSNVRDTERIPPGSSSSGSLLETDSMSKAGENTKIMEDNLTGIAEERRHILAMRRKPEADMHTQEVAESQAFPSTASQPDSSSIMGLTASPHEDNLESSHLQVGRANQASSLMGINRQIQPELINWTGIGNHNDASRGQLPVSAIQHEPLLERKDNTPSQSQSFGDTSVQGNQHSENHLSPFLLRDHWKPVSGMDNDHHKIFQTKEANLLIKHVSRDDSKVTEIQTRCISDGCKAVAIDDTTKNGYPYKMVEKSAEQGDEDRPMLVNLPPSPKCTTSEKWIMDQQKRRLHVEQNWLLKEQKTEKKIAACFEKLKGTVSSSEDISAKTKSVIELKKLQLLALQRRLRRDFLNDFFKPIAIELDRLKSFKKHRHGRRIKQLEKFEQKMKEERQKRIRERQKEFFSEIEVHKERLDDVFKFKRERWKSFSKYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMTRHFEVDMDENRTANVVEKNETAVDNEDESDQAKHYLESNEKYYLMAHSIKESIAEQPTCLQGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLSGWESEINFWAPSVNKIVYSGPPEERRKLFKERIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIVIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGSTKARSVHNSVMELRNICNHPYLSQLHADEVDNLIPKHFLPPVVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLDGHTSGGDRGALIEQFNQPDSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRLETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRESKKEEAMPVLDDDALNDLLARSESEIDIFESIDKKRQEAEMATWKKLVGQGMELAPPLPSRLVTDDDLKVFYQAMKIYEESNAGVISNVGVKRKGEYLGGLDTQQYGRGKRAREVRSYEEQWTEEEFEKLCQVDSPESPKLKEEMVETNLPIDSSGPVVATSNTESPAPAPAPAAPAAPAAPAPAPAAPAPAPAAPAPAPAPAPPPPPPPSAPSVEPPPQQSKEVTPPSRRGRGRPKRATLDISSAVVHPAPSGAEKLDTGSQKGNVSSFPTASGPHSFPGPTAVKGTSSSMHNVGVGVPAIPPQSLPPVPPGSQSTVPDSSVPVQVKGQGRKAQSGGEGPRRRGKKQASVPPAVPDALAGQDPKLNEQSQNKLGDPKLNEPSQNKLGDPKLNEQSHNNTGDSILTASSFPTTPGPDSVPASTTVKSISGTVQHFGVGIAPSSQAAPPLHLVASDSKSTPPCPPVVTQVKGQGRKTQSGAEAPRRRGRKQALLPPAVPGGLVGEEPANQGSQNKSGDLVGASSGTVSSLPVAPGPTPVSAVKVISGTMHHFGVGIAPSSQPVPPSPSVAPSSQSTPPCPTAPVRVKGQSQKAQSGAGAPRRRGKKQCPIPPGAPDSLAGQVPKSSEKAQSKSGDLLGSKAIAVGSEQEKDSRELANAIQQKACKIPTSNVLAGVDLKSTKQPDYSAQNKNQESCPQQIVLLVKIQYQMRRHRISLEIHWVIKLLP* 2267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3724866 3754247 + Vvi5g371 Vvi5g371 786513

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g371 2266 Coils Coil 1525 1545 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 638 658 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 550 575 - -
Vvi5g371 2266 Coils Coil 862 882 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1800 1817 - -
Vvi5g371 2266 Coils Coil 963 983 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 540 575 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1695 1709 - -
Vvi5g371 2266 SMART helicmild6 1398 1482 IPR001650 -
Vvi5g371 2266 SMART ultradead3 1045 1239 IPR014001 -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 2100 2118 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 491 514 - -
Vvi5g371 2266 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 113 1692 - -
Vvi5g371 2266 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 1815 1926 - -
Vvi5g371 2266 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 2082 2205 - -
Vvi5g371 2266 PANTHER CHROMATIN STRUCTURE-REMODELING COMPLEX PROTEIN SYD 1953 2064 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 2092 2193 - -
Vvi5g371 2266 PANTHER SNF2/RAD54 HELICASE FAMILY 1953 2064 - -
Vvi5g371 2266 PANTHER SNF2/RAD54 HELICASE FAMILY 1815 1926 - -
Vvi5g371 2266 PANTHER SNF2/RAD54 HELICASE FAMILY 113 1692 - -
Vvi5g371 2266 PANTHER SNF2/RAD54 HELICASE FAMILY 2082 2205 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1992 2080 - -
Vvi5g371 2266 Pfam Snf2-ATP coupling, chromatin remodelling complex 1576 1669 IPR029295 GO:0042393
Vvi5g371 2266 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1372 1518 IPR001650 -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1663 1688 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 463 514 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 2047 2073 - -
Vvi5g371 2266 Gene3D - 1040 1289 IPR038718 -
Vvi5g371 2266 Gene3D - 1290 1512 IPR027417 -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 75 100 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 122 233 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 76 100 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 635 658 - -
Vvi5g371 2266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1282 1577 IPR027417 -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 172 201 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1663 1965 - -
Vvi5g371 2266 CDD DEXHc_SMARCA2_SMARCA4 1046 1282 - -
Vvi5g371 2266 SMART SnAC_2 1575 1669 IPR029295 GO:0042393
Vvi5g371 2266 CDD SF2_C_SNF 1360 1492 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1710 1765 - -
Vvi5g371 2266 ProSiteProfiles HSA domain profile. 867 941 IPR014012 -
Vvi5g371 2266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1280 IPR027417 -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1927 1965 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 136 171 - -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 1905 1920 - -
Vvi5g371 2266 Pfam Helicase conserved C-terminal domain 1369 1482 IPR001650 -
Vvi5g371 2266 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1061 1228 IPR014001 -
Vvi5g371 2266 MobiDBLite consensus disorder prediction 2001 2016 - -
Vvi5g371 2266 Pfam SNF2-related domain 1053 1343 IPR000330 GO:0005524|GO:0140658
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g371 - - - vvi:100254600 4157.83
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g371 . . . . . Bpe14g01153 . . . . Cma06g01457 Cma14g01649 Car06g01259 Car14g01483 Sed02g1676 Cpe08g00220 Cpe03g01393 Bhi01g00925 Tan10g0941 Cmetu06g0809 . Hepe05g1489 . Lcy11g1461 . . . . . . . Cone14ag0789 Cone15ag0790 . . Lsi05g01493 . . Cme06g00682 Blo02g00553 . . . . . Bma02g00714 . . Cmo06g01459 Cmo14g01693 . . . . . . . . . . . . . Cla05g00609 Cam05g0669 Cec05g0679 Cco05g0673 Clacu05g0664 Cmu05g0632 Cre05g0702 . Csa03g01407 Chy06g00650 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006639 1 1 1 1 1 1 2 1 1 1 1 1 3 1 1 2 1 2 2 1 1 1 1 0 2 1 0 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14845 PF00176 SNF2_N 2.10E-69 CL0023 Vvi TR