Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g379 | ATGACTGTTTTGTTCGGGGCTGTGATGCATCAGTGCTATTGGATTCAACTAAAAATACGACTGCTTAGAAAGAAGCGTTACCGAACCGGTCATTGTCAGGATACGATGTTATTGATGATATCAAAGCTAAAATTGAAGAAGAGTGTCCTGGAGTGGTTTCATGTGCTGATATCCTGGCTCTGGCTGCTCGGGATGCTGTTTCGTACCAAACCCATGTGGCAGGTTCTAACCGGGAGGAAAGACGGAAGAGTTTCGCTTGCCTCGGATATCCCTGGCAACTTACCGCCACCCACAGCAGACTTCACATCTCTCCAGCAGCTCTTTGCAAGCAAAGGGCTAGACGTTATGGATCTTGTAGCCTTATCAGGGGCACATACAATTGGAGTGTCACATTGTAGTGTGATTGCAAGGAGGCTATACAATTTCACAGGAAAAGGGGATGCGGATCCTTCACTCGAACCAGATTACGCAAACAAGCTATGGAGGGAGTGTGGAAGCCCTCTTAATCCATCAACAACTGTAGACATGGACCCTGACCAGAGCTCACTCTCCTTTGACAGCCATTACTTCAAGATTGTCAGCCAAAACAAGGGCCTGTTTCAGTCTGATGCAACGCTGCTCACCAACCCCCAGTCGGCTCAGATGGTAGAAATGCTACAGCATGGCCGATTATTTTTTGTGCGCTTTGCTCAATCGATGAAGAAGATGGGAGGTATTGGTGTACTTACTGGAGATGAAGGAGAGATTCGGAAGCACTGTAGTCTTGTTAATGCCTGA | 777 | 47.23 | MTVLFGAVMHQCYWIQLKIRLLRKKRYRTGHCQDTMLLMISKLKLKKSVLEWFHVLISWLWLLGMLFRTKPMWQVLTGRKDGRVSLASDIPGNLPPPTADFTSLQQLFASKGLDVMDLVALSGAHTIGVSHCSVIARRLYNFTGKGDADPSLEPDYANKLWRECGSPLNPSTTVDMDPDQSSLSFDSHYFKIVSQNKGLFQSDATLLTNPQSAQMVEMLQHGRLFFVRFAQSMKKMGGIGVLTGDEGEIRKHCSLVNA* | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3842707 | 3844012 | + | Vvi5g379 | Vvi5g379 | 786521 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g379 | 258 | Gene3D | - | 68 | 257 | - | - | |
Vvi5g379 | 258 | PANTHER | PEROXIDASE 25-RELATED | 68 | 257 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | Gene3D | Peroxidase, domain 2 | 95 | 237 | - | - | |
Vvi5g379 | 258 | SUPERFAMILY | Heme-dependent peroxidases | 69 | 257 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | Pfam | Peroxidase | 70 | 219 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PANTHER | PEROXIDASE | 68 | 257 | - | - | |
Vvi5g379 | 258 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 117 | 127 | IPR019793 | - | |
Vvi5g379 | 258 | ProSiteProfiles | Plant heme peroxidase family profile. | 71 | 257 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Plant peroxidase signature | 69 | 84 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Plant peroxidase signature | 116 | 128 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Plant peroxidase signature | 176 | 191 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Plant peroxidase signature | 192 | 209 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Plant peroxidase signature | 231 | 244 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Haem peroxidase superfamily signature | 69 | 81 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Haem peroxidase superfamily signature | 117 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi5g379 | 258 | PRINTS | Haem peroxidase superfamily signature | 178 | 193 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g379 | K00430 | - | egr:104414959 | 247.284 |