Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g380 ATGCAGTTCCATGACTGCTTTGTTAGGGGGTGTGATGCATCTATACTATTGGATAGAGTCGGTACTGATCAGACTGAGAAGGATGCAAGACCCAATCTTTCACTCTCAGGTTACGATGAAATCAATGATATAAAGTCCAAACTTGAGCAGGCTTGCCCAGGAGTGGTTTCCTGTGCTGATATTCTCGCCTTGGCTGCTCGTGATGCTGTCTCCTTCCCATCCCGAACCCCCTTGTGGGATGTTCTTACTGGAAGAAGAGATGGAAACGTTTCTCTAGCCTCTGAAGTCAATGGAAACATACCTTCACCCTTCTCAGACTTCTCCACTCTCAAACAACTATTCGTCAAGAAAGGTCTTAATGTCAACGATCTAGTGGCACTCTCAGGCGCACACACCATTGGGTTTGCCCACTGCGGCACTTTCTCGAGGAGGCTCTACAACTTCACAGGCAAAGGCGATGCAGACCCTTCACTGAATGCAACCTACATTGAATCACTCAAGGCACAGTGTCCAAATCCAGCCAACGCCCAAACAACCGTGGAGATGGATCCTCAGAGTTCAGGCTCGTTTGACAGTAGTTATTTCAATATCCTTGTCCAGAATAAGGGTCTCTTCCAATCCGATGCTGCATTACTCACAGACAAGGCTTCCAGCAAGACAGTGCAACAGCTGCGAAAACCCAGGGCTTTCTTGGACGAGTTTGGTAAGTCCATGAAGAAGATGGCGGCTATAGGAGTGCTTACGGGAAAGGCTGGAGAGATTAGGAAACAGTGTGGGGTAGTAAATTAA 789 47.66 MQFHDCFVRGCDASILLDRVGTDQTEKDARPNLSLSGYDEINDIKSKLEQACPGVVSCADILALAARDAVSFPSRTPLWDVLTGRRDGNVSLASEVNGNIPSPFSDFSTLKQLFVKKGLNVNDLVALSGAHTIGFAHCGTFSRRLYNFTGKGDADPSLNATYIESLKAQCPNPANAQTTVEMDPQSSGSFDSSYFNILVQNKGLFQSDAALLTDKASSKTVQQLRKPRAFLDEFGKSMKKMAAIGVLTGKAGEIRKQCGVVN* 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3846130 3847498 + Vvi5g380 Vvi5g380 786522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g380 262 Gene3D Peroxidase, domain 2 101 242 - -
Vvi5g380 262 ProSitePatterns Peroxidases proximal heme-ligand signature. 123 133 IPR019793 -
Vvi5g380 262 CDD secretory_peroxidase 1 261 IPR033905 GO:0004601|GO:0042744
Vvi5g380 262 ProSiteProfiles Plant heme peroxidase family profile. 1 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PANTHER PEROXIDASE 1 260 - -
Vvi5g380 262 Pfam Peroxidase 1 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PANTHER PEROXIDASE 25-RELATED 1 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 SUPERFAMILY Heme-dependent peroxidases 1 262 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Plant peroxidase signature 36 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Plant peroxidase signature 55 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Plant peroxidase signature 75 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Plant peroxidase signature 122 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Plant peroxidase signature 236 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 Gene3D - 1 262 - -
Vvi5g380 262 PRINTS Haem peroxidase superfamily signature 56 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Haem peroxidase superfamily signature 75 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Haem peroxidase superfamily signature 123 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi5g380 262 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g380 Vvi7g201 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g380 K00430 - vvi:100254434 524.628