Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g401 | ATGAGTGGTACAACGGCGATTACGGTCCTTCTTATTGGGAATACCCTTTTTGTTGCAAATGTGGGTGATTCAAGGGCTGTGATTGCAGTTAAGGAGGGGAATCGAATTATTGCAGAAGATCTGTCTTATGATCAGACACCATTTAGAAAAGATGAATATGATAGAGTGAAGCTTTGTGGGGCCAGGGTTCTGAGTGTGGATCAAGTGGAAGGGCTTAAGGACCCAGATATTCAAACATGGGGTGATGAAGAAACTGAAGGAAGCGATCCTCCAAGGTTGTGGGTACAGAATGGTATGTACCCTGGGACTGCATTTACAAGGAGTGTAGGAGATGGTACAGCTGAGAAAATTGGTGTGATTGCTGTTCCTGAGGTGTCAATGATTGAGCTTGCATCCAATCATCTGTTTTTTGTTGTTGCAAGTGATGGGGTTTTTGAGTTTCTCTCCAGCCAGACCGTTGTCGAGATGGTGGCAAGATATCCAGATCCTAGAGATGCATGTGCAGCCATTGCTGGAGAATCATACAAACTATGGTTGGAGCATGAAAATCGAACTGATGATATAACAATCATCATTGTACACATTAGAGACCTATCTGATTCAGGTGCCAATACCATGGCTATCTTGAGGACAGGAAGAGGAGGAACTCCTGATGTATCCATTACTACTGGGTCAGAAGTTTTTCATTCAACGGTAAGTGAATTCTCAGATATGCAGCTTTGTTAG | 726 | 43.25 | MSGTTAITVLLIGNTLFVANVGDSRAVIAVKEGNRIIAEDLSYDQTPFRKDEYDRVKLCGARVLSVDQVEGLKDPDIQTWGDEETEGSDPPRLWVQNGMYPGTAFTRSVGDGTAEKIGVIAVPEVSMIELASNHLFFVVASDGVFEFLSSQTVVEMVARYPDPRDACAAIAGESYKLWLEHENRTDDITIIIVHIRDLSDSGANTMAILRTGRGGTPDVSITTGSEVFHSTVSEFSDMQLC* | 242 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4056168 | 4060179 | - | Vvi5g401 | Vvi5g401 | 786543 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g401 | 241 | CDD | PP2Cc | 2 | 195 | IPR001932 | - | |
Vvi5g401 | 241 | SUPERFAMILY | PP2C-like | 2 | 197 | IPR036457 | - | |
Vvi5g401 | 241 | PANTHER | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE | 1 | 228 | - | - | |
Vvi5g401 | 241 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 195 | IPR001932 | - | |
Vvi5g401 | 241 | PANTHER | PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN | 1 | 228 | - | - | |
Vvi5g401 | 241 | SMART | PP2C_4 | 1 | 193 | IPR001932 | - | |
Vvi5g401 | 241 | Gene3D | - | 1 | 197 | IPR036457 | - | |
Vvi5g401 | 241 | Pfam | Protein phosphatase 2C | 2 | 164 | IPR001932 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g401 | - | - | vri:117914949 | 458.759 |